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LEA49_ARATH
ID   LEA49_ARATH             Reviewed;         176 AA.
AC   Q9FK15;
DT   13-APR-2016, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 102.
DE   RecName: Full=Late embryogenesis abundant protein 49 {ECO:0000305};
DE            Short=LEA 49 {ECO:0000305};
GN   OrderedLocusNames=At5g53260 {ECO:0000312|Araport:AT5G53260};
GN   ORFNames=K19E1.6 {ECO:0000312|EMBL:BAB09788.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA   Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT   features of the regions of 1,367,185 bp covered by 19 physically assigned
RT   P1 and TAC clones.";
RL   DNA Res. 5:203-216(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=18318901; DOI=10.1186/1471-2164-9-118;
RA   Hundertmark M., Hincha D.K.;
RT   "LEA (late embryogenesis abundant) proteins and their encoding genes in
RT   Arabidopsis thaliana.";
RL   BMC Genomics 9:118-118(2008).
RN   [4]
RP   SUBCELLULAR LOCATION, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=25005920; DOI=10.1105/tpc.114.127316;
RA   Candat A., Paszkiewicz G., Neveu M., Gautier R., Logan D.C.,
RA   Avelange-Macherel M.-H., Macherel D.;
RT   "The ubiquitous distribution of late embryogenesis abundant proteins across
RT   cell compartments in Arabidopsis offers tailored protection against abiotic
RT   stress.";
RL   Plant Cell 26:3148-3166(2014).
CC   -!- FUNCTION: LEA proteins are late embryonic proteins abundant in higher
CC       plant seed embryos. The function of those proteins is not known.
CC       {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:25005920}. Nucleus
CC       {ECO:0000269|PubMed:25005920}.
CC   -!- SIMILARITY: Belongs to the LEA type SMP family. {ECO:0000305}.
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DR   EMBL; AB013388; BAB09788.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED96330.1; -; Genomic_DNA.
DR   RefSeq; NP_200138.1; NM_124705.1.
DR   AlphaFoldDB; Q9FK15; -.
DR   SMR; Q9FK15; -.
DR   PaxDb; Q9FK15; -.
DR   PRIDE; Q9FK15; -.
DR   ProteomicsDB; 230395; -.
DR   EnsemblPlants; AT5G53260.1; AT5G53260.1; AT5G53260.
DR   GeneID; 835407; -.
DR   Gramene; AT5G53260.1; AT5G53260.1; AT5G53260.
DR   KEGG; ath:AT5G53260; -.
DR   Araport; AT5G53260; -.
DR   TAIR; locus:2154242; AT5G53260.
DR   eggNOG; ENOG502R1JD; Eukaryota.
DR   HOGENOM; CLU_1549773_0_0_1; -.
DR   InParanoid; Q9FK15; -.
DR   OMA; MNVGHKP; -.
DR   OrthoDB; 1413772at2759; -.
DR   PhylomeDB; Q9FK15; -.
DR   PRO; PR:Q9FK15; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FK15; baseline and differential.
DR   GO; GO:0005829; C:cytosol; HDA:TAIR.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   InterPro; IPR042971; LEA_SMP.
DR   InterPro; IPR007011; LEA_SMP_dom.
DR   PANTHER; PTHR31174; PTHR31174; 1.
DR   Pfam; PF04927; SMP; 2.
PE   3: Inferred from homology;
KW   Cytoplasm; Nucleus; Reference proteome; Repeat.
FT   CHAIN           1..176
FT                   /note="Late embryogenesis abundant protein 49"
FT                   /id="PRO_0000436062"
FT   DOMAIN          49..106
FT                   /note="SMP 1"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          115..171
FT                   /note="SMP 2"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   176 AA;  18272 MW;  0EED0EA95B16D19D CRC64;
     MGSSKDSASV TNISVEEHFS VSQSSPGGQF VGPTEEISTA AEALIGRSTT LTEALKAASM
     NVGHKPVETT DVAAIKEVET RAIGGDIESE GGVTAVASKA VARNQKIGKD NEKTNLGDVI
     AEIDVKVTRD REVTSEDAEA VIRAELNHSP FNNIIPGGVA ESVAAAYKLN HDPSSL
 
 
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