LGA1_HYPJE
ID LGA1_HYPJE Reviewed; 315 AA.
AC A6Y9S5;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=L-threo-3-deoxy-hexylosonate aldolase;
DE EC=4.1.2.54;
DE AltName: Full=L-threo-3-deoxy-hexulosonate aldolase;
GN Name=lga1; Synonyms=kdg1;
OS Hypocrea jecorina (Trichoderma reesei).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.
OX NCBI_TaxID=51453;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 44-59; 77-91; 104-119 AND
RP 277-287, FUNCTION, CATALYTIC ACTIVITY, BIOPHYSICOCHEMICAL PROPERTIES,
RP PATHWAY, AND DISRUPTION PHENOTYPE.
RC STRAIN=VTT-D-80133;
RX PubMed=17609199; DOI=10.1074/jbc.m704401200;
RA Hilditch S., Berghall S., Kalkkinen N., Penttila M., Richard P.;
RT "The missing link in the fungal D-galacturonate pathway: identification of
RT the L-threo-3-deoxy-hexulosonate aldolase.";
RL J. Biol. Chem. 282:26195-26201(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION.
RC STRAIN=CBS 383.78;
RX PubMed=18768163; DOI=10.1016/j.fgb.2008.08.002;
RA Martens-Uzunova E.S., Schaap P.J.;
RT "An evolutionary conserved d-galacturonic acid metabolic pathway operates
RT across filamentous fungi capable of pectin degradation.";
RL Fungal Genet. Biol. 45:1449-1457(2008).
CC -!- FUNCTION: Mediates the conversion of 2-dehydro-3-deoxy-L-galactonate to
CC pyruvate and L-glyceraldehyde in D-galacturonate catabolic process.
CC {ECO:0000269|PubMed:17609199, ECO:0000269|PubMed:18768163}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-dehydro-3-deoxy-L-galactonate = L-glyceraldehyde + pyruvate;
CC Xref=Rhea:RHEA:38107, ChEBI:CHEBI:15361, ChEBI:CHEBI:27975,
CC ChEBI:CHEBI:75545; EC=4.1.2.54;
CC Evidence={ECO:0000269|PubMed:17609199};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=3.5 mM for 2-dehydro-3-deoxy-L-galactonate
CC {ECO:0000269|PubMed:17609199};
CC KM=3.8 mM for D-glycero-3-deoxy-pentulosonate
CC {ECO:0000269|PubMed:17609199};
CC KM=0.5 mM for pyruvate {ECO:0000269|PubMed:17609199};
CC KM=1.2 mM for L-glyceraldehyde {ECO:0000269|PubMed:17609199};
CC KM=6.5 mM for glycolaldehyde {ECO:0000269|PubMed:17609199};
CC Vmax=20.3 umol/min/mg enzyme with 2-dehydro-3-deoxy-L-galactonate as
CC substrate {ECO:0000269|PubMed:17609199};
CC Vmax=12.5 umol/min/mg enzyme with D-glycero-3-deoxy-pentulosonate as
CC substrate {ECO:0000269|PubMed:17609199};
CC Vmax=6.5 umol/min/mg enzyme with pyruvate and L-glyceraldehyde as
CC substrates {ECO:0000269|PubMed:17609199};
CC Vmax=0.9 umol/min/mg enzyme with glycolaldehyde as substrate
CC {ECO:0000269|PubMed:17609199};
CC -!- PATHWAY: Carbohydrate acid metabolism. {ECO:0000269|PubMed:17609199}.
CC -!- DISRUPTION PHENOTYPE: Cells are unable to grow on D-galacturonate.
CC {ECO:0000269|PubMed:17609199}.
CC -!- SIMILARITY: Belongs to the DapA family. {ECO:0000305}.
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DR EMBL; EF203091; ABP04235.1; -; mRNA.
DR EMBL; EF563987; ABQ53584.1; -; Genomic_DNA.
DR AlphaFoldDB; A6Y9S5; -.
DR SMR; A6Y9S5; -.
DR KEGG; ag:ABP04235; -.
DR OMA; YYGYGGF; -.
DR BioCyc; MetaCyc:MON-15605; -.
DR BRENDA; 4.1.2.54; 6451.
DR SABIO-RK; A6Y9S5; -.
DR GO; GO:0016832; F:aldehyde-lyase activity; IDA:UniProtKB.
DR GO; GO:0019698; P:D-galacturonate catabolic process; IDA:UniProtKB.
DR Gene3D; 3.20.20.70; -; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR002220; DapA-like.
DR PANTHER; PTHR12128; PTHR12128; 1.
DR Pfam; PF00701; DHDPS; 1.
DR PIRSF; PIRSF001365; DHDPS; 1.
DR PRINTS; PR00146; DHPICSNTHASE.
DR SMART; SM01130; DHDPS; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Direct protein sequencing; Lyase.
FT CHAIN 1..315
FT /note="L-threo-3-deoxy-hexylosonate aldolase"
FT /id="PRO_0000425569"
FT ACT_SITE 174
FT /note="Schiff-base intermediate with substrate"
FT /evidence="ECO:0000250"
FT BINDING 50..51
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT SITE 145
FT /note="Involved in proton transfer during cleavage"
FT /evidence="ECO:0000250"
FT CONFLICT 51
FT /note="N -> D (in Ref. 1; AA sequence)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 315 AA; 33407 MW; E6979A0B24A88AA7 CRC64;
MAPPSLPCGI YAPTMTFFHP ESEDIDIPTI KHHAQRLAKA GLAGLVVMGS NGEAVHCTRD
EKIAVLSATR EALDAAGFQS VPVLFGATEG SVRGTIELCK LAAAAGAAAA LVLPPSYYRA
QTDEASIEAY FVAVADASPI PLVLYNYPGA VSGIDMDSDL LIRLAQHKNI VGTKFTCGNT
GKLTRVALAT DAKTPFRDGS GYMAFGGMCD FTLQTLVSGG SGIIAGGANV MPKLCVKVWD
SYSQGNRDEA EKLQKVLSRG DWPLTKAAIA GTKSAIQTYY GYGGYPRRPL KRLEQARVSA
IEEGIREAME IEKTL