LGD1_HYPJE
ID LGD1_HYPJE Reviewed; 450 AA.
AC Q0QWS4;
DT 19-FEB-2014, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=L-galactonate dehydratase;
DE EC=4.2.1.146;
GN Name=lgd1;
OS Hypocrea jecorina (Trichoderma reesei).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Hypocreaceae; Trichoderma.
OX NCBI_TaxID=51453;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, CATALYTIC ACTIVITY, COFACTOR,
RP PATHWAY, AND DISRUPTION PHENOTYPE.
RC STRAIN=ATCC 56765 / Rut C-30;
RX PubMed=16879654; DOI=10.1111/j.1365-2958.2006.05294.x;
RA Kuorelahti S., Jouhten P., Maaheimo H., Penttila M., Richard P.;
RT "L-galactonate dehydratase is part of the fungal path for D-galacturonic
RT acid catabolism.";
RL Mol. Microbiol. 61:1060-1068(2006).
CC -!- FUNCTION: Mediates the conversion of L-galactonate to 2-dehydro-3-
CC deoxy-L-galactonate, the second step in D-galacturonate catabolic
CC process. {ECO:0000269|PubMed:16879654}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-galactonate = 2-dehydro-3-deoxy-L-galactonate + H2O;
CC Xref=Rhea:RHEA:38103, ChEBI:CHEBI:15377, ChEBI:CHEBI:53071,
CC ChEBI:CHEBI:75545; EC=4.2.1.146;
CC Evidence={ECO:0000269|PubMed:16879654};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Note=Divalent metal ions. Magnesium seems to be the preferred ion.
CC {ECO:0000250};
CC -!- PATHWAY: Carbohydrate acid metabolism. {ECO:0000269|PubMed:16879654}.
CC -!- DISRUPTION PHENOTYPE: Cells are unable to grow on D-galacturonate.
CC {ECO:0000269|PubMed:16879654}.
CC -!- SIMILARITY: Belongs to the mandelate racemase/muconate lactonizing
CC enzyme family. {ECO:0000305}.
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DR EMBL; DQ181420; ABA60340.1; -; mRNA.
DR AlphaFoldDB; Q0QWS4; -.
DR SMR; Q0QWS4; -.
DR VEuPathDB; FungiDB:TrQ_009564; -.
DR OMA; SGAIDVC; -.
DR BioCyc; MetaCyc:MON-15604; -.
DR BRENDA; 4.2.1.146; 6451.
DR GO; GO:0004089; F:carbonate dehydratase activity; IDA:UniProtKB.
DR GO; GO:0050023; F:L-fuconate dehydratase activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009063; P:cellular amino acid catabolic process; IEA:InterPro.
DR GO; GO:0019698; P:D-galacturonate catabolic process; IDA:UniProtKB.
DR CDD; cd03324; rTSbeta_L-fuconate_dehydratase; 1.
DR Gene3D; 3.20.20.120; -; 1.
DR Gene3D; 3.30.390.10; -; 1.
DR InterPro; IPR036849; Enolase-like_C_sf.
DR InterPro; IPR029017; Enolase-like_N.
DR InterPro; IPR029065; Enolase_C-like.
DR InterPro; IPR034610; L-fuconate_dehydratase.
DR InterPro; IPR018110; Mandel_Rmase/mucon_lact_enz_CS.
DR InterPro; IPR013342; Mandelate_racemase_C.
DR Pfam; PF13378; MR_MLE_C; 1.
DR SFLD; SFLDF00111; L-fuconate_dehydratase; 1.
DR SMART; SM00922; MR_MLE; 1.
DR SUPFAM; SSF51604; SSF51604; 1.
DR SUPFAM; SSF54826; SSF54826; 1.
DR PROSITE; PS00909; MR_MLE_2; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Lyase; Magnesium; Metal-binding.
FT CHAIN 1..450
FT /note="L-galactonate dehydratase"
FT /id="PRO_0000425568"
FT ACT_SITE 221
FT /evidence="ECO:0000250"
FT ACT_SITE 356
FT /evidence="ECO:0000250"
FT BINDING 251
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 277
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
FT BINDING 306
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250"
SQ SEQUENCE 450 AA; 50124 MW; 786A8E7639A3407C CRC64;
MSEVTITGFR SRDVRFPTSL DKTGSDAMNA AGDYSAAYCI LETDSAHSGH GMTFTIGRGN
DIVCAAINHV ADRLKGKKLS SLVADWGKTW RYLVNDSQLR WIGPEKGVIH LALGAVVNAV
WDLWAKTLNK PVWRIVADMT PEEYVRCIDF RYITDAITPE EAVAMLREQE AGKAKRIEEA
LQNRAVPAYT TSAGWLGYGE DKMKQLLRET LAAGYRHFKV KVGGSVEEDR RRLGIAREIL
GFDKGNVLMV DANQVWSVPE AIDYMKQLSE YKPWFIEEPT SPDDIMGHKA IRDALKPYGI
GVATGEMCQN RVMFKQLIMT GAIDICQIDA CRLGGVNEVL AVLLMAKKYG VPIVPHSGGV
GLPEYTQHLS TIDYVVVSGK LSVLEFVDHL HEHFLHPSVI KDGYYQTPTE AGYSVEMKPE
SMDKYEYPGK KGVSWWTTDE ALPILNGEKI