LGI2_PANTR
ID LGI2_PANTR Reviewed; 545 AA.
AC Q1EGL1;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Leucine-rich repeat LGI family member 2;
DE AltName: Full=Leucine-rich glioma-inactivated protein 2;
DE Flags: Precursor;
GN Name=LGI2;
OS Pan troglodytes (Chimpanzee).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pan.
OX NCBI_TaxID=9598;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Gu W., Gilbert Y., Freudenberg J., Elischer A., Bloch W., Meyer A.,
RA Steinlein O., Begemann G.;
RT "The evolution of the LGI family.";
RL Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for the development of soma-targeting inhibitory
CC GABAergic synapses made by parvalbumin-positive basket cells.
CC {ECO:0000250|UniProtKB:Q8K4Z0}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY615299; AAV49151.1; -; mRNA.
DR RefSeq; NP_001037843.1; NM_001044378.1.
DR AlphaFoldDB; Q1EGL1; -.
DR SMR; Q1EGL1; -.
DR STRING; 9598.ENSPTRP00000027477; -.
DR PaxDb; Q1EGL1; -.
DR Ensembl; ENSPTRT00000078744; ENSPTRP00000089349; ENSPTRG00000045126.
DR GeneID; 471159; -.
DR KEGG; ptr:471159; -.
DR CTD; 55203; -.
DR VGNC; VGNC:13016; LGI2.
DR eggNOG; ENOG502QR53; Eukaryota.
DR GeneTree; ENSGT00940000157294; -.
DR HOGENOM; CLU_036403_0_0_1; -.
DR InParanoid; Q1EGL1; -.
DR OMA; QDIEVTK; -.
DR OrthoDB; 365688at2759; -.
DR TreeFam; TF333155; -.
DR Proteomes; UP000002277; Chromosome 4.
DR Bgee; ENSPTRG00000045126; Expressed in colon and 11 other tissues.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:1904862; P:inhibitory synapse assembly; ISS:UniProtKB.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR000483; Cys-rich_flank_reg_C.
DR InterPro; IPR009039; EAR.
DR InterPro; IPR005492; EPTP.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF03736; EPTP; 6.
DR Pfam; PF13855; LRR_8; 1.
DR SMART; SM00369; LRR_TYP; 3.
DR SMART; SM00082; LRRCT; 1.
DR PROSITE; PS50912; EAR; 7.
PE 2: Evidence at transcript level;
KW Glycoprotein; Leucine-rich repeat; Reference proteome; Repeat; Secreted;
KW Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..545
FT /note="Leucine-rich repeat LGI family member 2"
FT /id="PRO_0000251157"
FT DOMAIN 29..65
FT /note="LRRNT"
FT REPEAT 86..107
FT /note="LRR 1"
FT REPEAT 110..131
FT /note="LRR 2"
FT REPEAT 134..155
FT /note="LRR 3"
FT DOMAIN 167..217
FT /note="LRRCT"
FT REPEAT 219..261
FT /note="EAR 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 265..307
FT /note="EAR 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 311..358
FT /note="EAR 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 360..403
FT /note="EAR 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 407..450
FT /note="EAR 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 452..494
FT /note="EAR 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT REPEAT 498..540
FT /note="EAR 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00075"
FT CARBOHYD 70
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 186
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 271
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 402
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 545 AA; 62298 MW; FD29B51F01B3D7E2 CRC64;
MALRRGGCGA LGLLLLLLGA ACLIPRSAQV RRLARCPATC SCTKESIICV GSSWVPRIVP
GDISSLSLVN GTFSEIKDRM FSHLPSLQLL LLNSNSFTII RDDAFAGLFH LEYLFIEGNK
IETISRNAFR GLRDLTHLSL ANNHIKALPR DVFSDLDSLI ELDLRGNKFE CDCKAKWLYL
WLKMTNSTVS DVLCIGPPEY QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKN
DVYVAIAQPS MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIDDQVF VVVAQLFGGS
HIYKYDESWT KFVKFQDIEV SRISKPNDIE LFQIDDETFF VIADSSKAGL STVYKWNSKG
FYSYQSLHEW FRDTDAEFVD IDGKSHLILS SRSQVPIILQ WNKSSKKFVP HGDIPNMEDV
LAVKSFRMQN TLYLSLTRFI GDSRVMRWNS KQFVEIQALP SRGAMTLQPF SFKDNHYLAL
GSDYTFSQIY QWDKEKQLFK KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHII
VDLSL