LHP1_SOLLC
ID LHP1_SOLLC Reviewed; 399 AA.
AC Q944N1;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2005, sequence version 2.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=Chromo domain protein LHP1;
DE AltName: Full=Protein LIKE HETEROCHROMATIN PROTEIN 1;
DE AltName: Full=Sl LHP1;
GN Name=LHP1; Synonyms=HP1-L;
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], MUTAGENESIS OF 114-TRP--TRP-117, INTERACTION
RP WITH H3, AND SUBCELLULAR LOCATION.
RX PubMed=16361394; DOI=10.1105/tpc.105.036855;
RA Zemach A., Li Y., Ben-Meir H., Oliva M., Mosquna A., Kiss V., Avivi Y.,
RA Ohad N., Grafi G.;
RT "Different domains control the localization and mobility of LIKE
RT HETEROCHROMATIN PROTEIN1 in Arabidopsis nuclei.";
RL Plant Cell 18:133-145(2006).
CC -!- FUNCTION: Structural component of heterochromatin involved in gene
CC repression. Recognizes and binds histone H3 tails methylated at 'Lys-
CC 9', leading to epigenetic repression.
CC -!- SUBUNIT: Homodimer. Interacts with H3. {ECO:0000269|PubMed:16361394}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16361394}.
CC Note=Punctuated distribution and in heterochromatic chromocenters.
CC -!- DOMAIN: The chromo domain specifically binds to dimethylated H3 'Lys-9'
CC while the chromo shadow domain is required for dimerization.
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: Heterologous expression in Arabidopsis shows an
CC additional localization at specific nucleolar compartments and a cell-
CC type dependent subnuclear localization.
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DR EMBL; AF428244; AAL25116.2; -; mRNA.
DR AlphaFoldDB; Q944N1; -.
DR SMR; Q944N1; -.
DR STRING; 4081.Solyc01g081500.2.1; -.
DR PaxDb; Q944N1; -.
DR PRIDE; Q944N1; -.
DR eggNOG; KOG1911; Eukaryota.
DR InParanoid; Q944N1; -.
DR Proteomes; UP000004994; Unplaced.
DR ExpressionAtlas; Q944N1; baseline and differential.
DR GO; GO:0000792; C:heterochromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031507; P:heterochromatin assembly; IEA:InterPro.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR008251; Chromo_shadow_dom.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR044251; LHP1-like.
DR PANTHER; PTHR47240; PTHR47240; 1.
DR Pfam; PF00385; Chromo; 1.
DR SMART; SM00298; CHROMO; 1.
DR SMART; SM00300; ChSh; 1.
DR SUPFAM; SSF54160; SSF54160; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 1: Evidence at protein level;
KW Chromatin regulator; Nucleus; Reference proteome; Repeat; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..399
FT /note="Chromo domain protein LHP1"
FT /id="PRO_0000247865"
FT DOMAIN 93..152
FT /note="Chromo 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00053"
FT DOMAIN 332..396
FT /note="Chromo 2; shadow subtype"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00053"
FT REGION 1..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..53
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MUTAGEN 114..117
FT /note="WRGW->GRGG: Loss of interaction with 'K-9' of H3 and
FT loss of chromocenter localization and punctuated
FT distribution inside the nucleus."
FT /evidence="ECO:0000269|PubMed:16361394"
SQ SEQUENCE 399 AA; 44098 MW; F8C3980FF4DB998B CRC64;
MKEGKRKSSR LQSEAAGAGS SRKLDLDGVA AERQERNGYP EDAGSKCEEE PVAGEGEGEG
EEKDEAPEVV RVEKGDGDGV AKKVKPKLAE GFYEIETVRR RRTVKGKVYY LIKWRGWPES
ANTWEPETNL SSCTDIIDAY EESLKSGKLR RRKRKFGATQ THPMIKQQRR FSAPVATYNG
PAVKVRIIEE PTPSPPLNVL KATDLVDSNG SELNSKVDEV VNGNGLRLRE QNELNLKLSE
LKGATSTNGN PVDISGNGLT NGFPKVNGAE FYQSDRCTGA KKRKSGCVRR FKRETTSAVK
DDTQDALAGG PLATFMQDGS HNHVMVADDS KDGYTITQLV NPVSYKASFS NDMLDVSVTF
VAKRADGNLV LVDNKFLKMN NPLLLINFYE ENMRYHPTE