LHPL6_RAT
ID LHPL6_RAT Reviewed; 200 AA.
AC Q5BJS2;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 12-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=LHFPL tetraspan subfamily member 6 protein {ECO:0000312|RGD:1560177};
DE AltName: Full=Lipoma HMGIC fusion partner {ECO:0000250|UniProtKB:Q9Y693};
DE Flags: Precursor;
GN Name=Lhfpl6 {ECO:0000312|RGD:1560177};
GN Synonyms=Lhfp {ECO:0000250|UniProtKB:Q8BM86};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the LHFP family. {ECO:0000305}.
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DR EMBL; BC091355; AAH91355.1; -; mRNA.
DR RefSeq; NP_001102653.1; NM_001109183.1.
DR AlphaFoldDB; Q5BJS2; -.
DR SMR; Q5BJS2; -.
DR STRING; 10116.ENSRNOP00000019057; -.
DR PhosphoSitePlus; Q5BJS2; -.
DR PaxDb; Q5BJS2; -.
DR Ensembl; ENSRNOT00000117418; ENSRNOP00000092096; ENSRNOG00000014153.
DR GeneID; 499615; -.
DR KEGG; rno:499615; -.
DR UCSC; RGD:1560177; rat.
DR CTD; 10186; -.
DR RGD; 1560177; Lhfpl6.
DR eggNOG; KOG4026; Eukaryota.
DR GeneTree; ENSGT00990000203589; -.
DR HOGENOM; CLU_084868_2_0_1; -.
DR InParanoid; Q5BJS2; -.
DR OMA; ITVMVEQ; -.
DR OrthoDB; 1383327at2759; -.
DR PhylomeDB; Q5BJS2; -.
DR TreeFam; TF321143; -.
DR PRO; PR:Q5BJS2; -.
DR Proteomes; UP000002494; Chromosome 2.
DR Bgee; ENSRNOG00000014153; Expressed in lung and 19 other tissues.
DR Genevisible; Q5BJS2; RN.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR InterPro; IPR019372; LHFPL.
DR PANTHER; PTHR12489; PTHR12489; 1.
DR Pfam; PF10242; L_HMGIC_fpl; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..200
FT /note="LHFPL tetraspan subfamily member 6 protein"
FT /id="PRO_0000244758"
FT TRANSMEM 84..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 123..143
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 166..186
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 200 AA; 21666 MW; B79B0214F15FB3A1 CRC64;
MASSLTCTGV IWALLSFLSA ATSCVGFFMP YWLWGSQLGK PVSFGTFRRC SYPVHDESRQ
MMVMVEECGR YASFQGIPST EWRICTIVTG LGCGLLLLVA LTALMGCCVS ELISRTVGRV
AGGIQFLGGL LIGAGCALYP LGWDSEEVRQ TCGYISDQFD LGKCEIGWAY YCTGAGAAAA
MLLCTWLACF SGKKQKHYPY