LIN1_SCHPO
ID LIN1_SCHPO Reviewed; 408 AA.
AC O94693;
DT 23-MAY-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=LIN1-like protein;
GN ORFNames=SPBC83.09c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
CC -!- SIMILARITY: Belongs to the LIN1 family. {ECO:0000305}.
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DR EMBL; CU329671; CAB36871.1; -; Genomic_DNA.
DR PIR; T40698; T40698.
DR RefSeq; NP_595641.1; NM_001021535.2.
DR AlphaFoldDB; O94693; -.
DR BioGRID; 277576; 12.
DR STRING; 4896.SPBC83.09c.1; -.
DR iPTMnet; O94693; -.
DR MaxQB; O94693; -.
DR PaxDb; O94693; -.
DR PRIDE; O94693; -.
DR EnsemblFungi; SPBC83.09c.1; SPBC83.09c.1:pep; SPBC83.09c.
DR GeneID; 2541061; -.
DR KEGG; spo:SPBC83.09c; -.
DR PomBase; SPBC83.09c; -.
DR VEuPathDB; FungiDB:SPBC83.09c; -.
DR eggNOG; KOG2950; Eukaryota.
DR HOGENOM; CLU_674659_0_0_1; -.
DR InParanoid; O94693; -.
DR OMA; VRKCGEN; -.
DR PhylomeDB; O94693; -.
DR PRO; PR:O94693; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0005682; C:U5 snRNP; ISO:PomBase.
DR GO; GO:0000244; P:spliceosomal tri-snRNP complex assembly; ISS:PomBase.
DR CDD; cd00072; GYF; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR InterPro; IPR039905; CD2BP2/Lin1.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR PANTHER; PTHR13138; PTHR13138; 1.
DR Pfam; PF02213; GYF; 1.
DR SMART; SM00444; GYF; 1.
DR SUPFAM; SSF55277; SSF55277; 1.
DR PROSITE; PS50829; GYF; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..408
FT /note="LIN1-like protein"
FT /id="PRO_0000195037"
FT DOMAIN 344..402
FT /note="GYF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00101"
FT REGION 1..161
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..42
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..133
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..148
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 408 AA; 47388 MW; A34EBBD9F345E9B2 CRC64;
MKRTLRNPGN SSTVGDVHDV FFEYDVSNVG RKRPRTKEEG YYESESEEDE DQILNKEKKE
GQSEDMFSDT SEDEKRTLPN DEAQKRRDFI ENGDAERLAH KGLRNKEVLN DDSDDEDDNG
KYSKLRYEDI EGQEDTNQAN DLDADEEGSE ISVPSSPKRM SFNLKEDMEE GDFDENGNFI
RKNYDPESQY DAWLNGSVSN KKSIAAAREA EQKRKEMENR RRNQELEEFS KLPFSTVPEA
LSFFIARMER DESILEFLQR QSGNKKSYKK KKNNTAEGIS PERKSADAFR KKLIELITAG
LTFLEDKIGK EDIYSETRES LQRIYQKLTS NSWSSPVSYD DSNSSQYNFK WEFDDKTYGP
YTASQIQAWS NEGYFTDAKH AAFIQLANMD EWMYPNNICF CDVVSLKK