LIN56_CAEEL
ID LIN56_CAEEL Reviewed; 322 AA.
AC Q09377;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 15-JUL-1998, sequence version 2.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Protein lin-56;
DE AltName: Full=Abnormal cell lineage protein 56;
GN Name=lin-56; ORFNames=ZK673.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE,
RP AND DISRUPTION PHENOTYPE.
RX PubMed=21196525; DOI=10.1534/genetics.110.124487;
RA Davison E.M., Saffer A.M., Huang L.S., DeModena J., Sternberg P.W.,
RA Horvitz H.R.;
RT "The LIN-15A and LIN-56 transcriptional regulators interact to negatively
RT regulate EGF/Ras signaling in Caenorhabditis elegans vulval cell-fate
RT determination.";
RL Genetics 187:803-815(2011).
CC -!- FUNCTION: Required for translation, stability and/or localization of
CC lin-15a. {ECO:0000269|PubMed:21196525}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:21196525}.
CC -!- TISSUE SPECIFICITY: Widely expressed throughout embryonic development.
CC Expressed in the six multipotent ventral ectodermal blast cells, P3.p-
CC P8.p, which generate the vulva and in their descendants throughout
CC vulval development. {ECO:0000269|PubMed:21196525}.
CC -!- DEVELOPMENTAL STAGE: Expressed from the early one-cell or late two-cell
CC stage and continues throughout embryonic and larval development and in
CC adulthood. {ECO:0000269|PubMed:21196525}.
CC -!- DISRUPTION PHENOTYPE: Greatly reduced nuclear accumulation of lin-15a
CC protein but no effect on mRNA levels. {ECO:0000269|PubMed:21196525}.
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DR EMBL; Z48585; CAA88485.1; -; Genomic_DNA.
DR PIR; T27966; T27966.
DR RefSeq; NP_496246.1; NM_063845.3.
DR AlphaFoldDB; Q09377; -.
DR BioGRID; 39927; 4.
DR IntAct; Q09377; 4.
DR STRING; 6239.ZK673.3; -.
DR EPD; Q09377; -.
DR PaxDb; Q09377; -.
DR PeptideAtlas; Q09377; -.
DR EnsemblMetazoa; ZK673.3.1; ZK673.3.1; WBGene00003038.
DR GeneID; 174609; -.
DR KEGG; cel:CELE_ZK673.3; -.
DR UCSC; ZK673.3; c. elegans.
DR CTD; 174609; -.
DR WormBase; ZK673.3; CE16743; WBGene00003038; lin-56.
DR eggNOG; ENOG502TK40; Eukaryota.
DR HOGENOM; CLU_863906_0_0_1; -.
DR InParanoid; Q09377; -.
DR SignaLink; Q09377; -.
DR PRO; PR:Q09377; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00003038; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0010628; P:positive regulation of gene expression; IMP:UniProtKB.
DR GO; GO:0034504; P:protein localization to nucleus; IMP:UniProtKB.
DR GO; GO:0050821; P:protein stabilization; IMP:UniProtKB.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR GO; GO:0040025; P:vulval development; IEP:UniProtKB.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Translation regulation.
FT CHAIN 1..322
FT /note="Protein lin-56"
FT /id="PRO_0000065537"
FT REGION 264..322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..309
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 322 AA; 36927 MW; BC4B948D0416F2DA CRC64;
MDHHAMYRTA EFNKTTVRLL AEFIEKTGQN ATIVNMDSFL EFFAYLNPTA PIPTVPEIEK
QLLLKSPIRC IVCGMETESD SAVTLSIDNA SIILTATVIG YCRDPSDAVN QIRKESLRAC
TKHFNSIFHV IFEGLQIENT YCAHHAKYSL ANRWCKVYTM IRSSLGEQFT KFDVRNFKSI
LQSFLDTFGE IDDDKKDKES SHFDECFEEM DSENVEIKME SPQEEAAEKS KFSENLVEVK
LEPIETHELD KTISDFSSSD IIDSSQKLQQ NGFPEKVEQM DKYSNKLKDE ASDKKYEKPG
KKDYVEEEGY WAPITDSEDD EA