LMBD1_AJECN
ID LMBD1_AJECN Reviewed; 590 AA.
AC A6QTW5;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 25-MAY-2022, entry version 49.
DE RecName: Full=Probable lysosomal cobalamin transporter;
GN ORFNames=HCAG_00821;
OS Ajellomyces capsulatus (strain NAm1 / WU24) (Darling's disease fungus)
OS (Histoplasma capsulatum).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma;
OC unclassified Histoplasma.
OX NCBI_TaxID=2059318;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NAm1 / WU24;
RX PubMed=19717792; DOI=10.1101/gr.087551.108;
RA Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA Henn M.R., Birren B.W., Taylor J.W.;
RT "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT and their relatives.";
RL Genome Res. 19:1722-1731(2009).
CC -!- FUNCTION: Probable lysosomal cobalamin transporter. Required to export
CC cobalamin from lysosomes allowing its conversion to cofactors (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Lysosome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the LIMR family. LMBRD1 subfamily.
CC {ECO:0000305}.
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DR EMBL; CH476655; EDN02957.1; -; Genomic_DNA.
DR RefSeq; XP_001543775.1; XM_001543725.1.
DR AlphaFoldDB; A6QTW5; -.
DR SMR; A6QTW5; -.
DR STRING; 339724.A6QTW5; -.
DR TCDB; 9.A.54.1.3; the lysosomal cobalamin (b12) transporter (l-b12t) family.
DR EnsemblFungi; EDN02957; EDN02957; HCAG_00821.
DR GeneID; 5450939; -.
DR KEGG; aje:HCAG_00821; -.
DR VEuPathDB; FungiDB:HCAG_00821; -.
DR HOGENOM; CLU_028341_1_0_1; -.
DR OMA; IITTFTW; -.
DR OrthoDB; 744771at2759; -.
DR Proteomes; UP000009297; Unassembled WGS sequence.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031419; F:cobalamin binding; IEA:UniProtKB-KW.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR Pfam; PF04791; LMBR1; 1.
PE 3: Inferred from homology;
KW Cobalamin; Cobalt; Lysosome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..590
FT /note="Probable lysosomal cobalamin transporter"
FT /id="PRO_0000365821"
FT TRANSMEM 8..28
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 46..66
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 94..114
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 145..165
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 314..334
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 348..367
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 376..396
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 421..441
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 508..528
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 567..590
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 572..590
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 590 AA; 66363 MW; 75393DA1C398C437 CRC64;
MALLQSSLIW VVYAIVFFLL VAVSSIFIYI YQTPSERSTY VTTVCIFTLT ALLATVLLLP
VDVALVSSTT SSREGRRKSW ATQDEVDKIT FSLAVAYYFL YSLDAVLCLL VVPFTYFWYE
EYDEVASEDG SQTFRKRFWG AFKYTVAFIL LTVILFLVGF FVPIGRRKDK PNLDLDYFRR
LLTENHGERA LTFALGLLIT IGILVYVLYT STGLALLPVT IIKSAPAISS PTLSANTASR
LEENIERQRQ LEGRCGGNPD RLPSKQRREL DSLVRQARTL RRRQRLAEEA RRPSGSWLLN
AWFKLSAVFR PLKLLSGLLL LAIAMLVWVS MLLTSIDKAM NSICKQNCGY ILGKTNILNP
INWVFVHSSK VFPVDYILFV FLVLVFFCSS VVGIATTGIR FLWVRIFQLR KGHTSPQALL
ITTVMLTLIT LALNYSISMV VAPQYATYGP QTFCDHPPKH PGEQPDCTGL EPLIKPCSEL
SENPTAKEIC TPTVVSTFLN RITLNFPFFG IVDFWAQFFF LGLSLLVFLV TIFRTPKLDE
QQFDEDAEAA EEEGLLASTG RRFGATWEDI TGRASRSPQV SGSAGRGTRE