LMBD1_BOTFB
ID LMBD1_BOTFB Reviewed; 593 AA.
AC A6RN41;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 25-MAY-2022, entry version 61.
DE RecName: Full=Probable lysosomal cobalamin transporter;
GN ORFNames=BC1G_01863;
OS Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis
OS cinerea).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Sclerotiniaceae; Botrytis.
OX NCBI_TaxID=332648;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B05.10;
RX PubMed=21876677; DOI=10.1371/journal.pgen.1002230;
RA Amselem J., Cuomo C.A., van Kan J.A.L., Viaud M., Benito E.P., Couloux A.,
RA Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E.,
RA Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.-M.,
RA Quevillon E., Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P.,
RA Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I.,
RA Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P.,
RA Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C.,
RA Grossetete S., Gueldener U., Henrissat B., Howlett B.J., Kodira C.,
RA Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E.,
RA Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N.,
RA Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E.,
RA Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O.,
RA Zeng Q., Rollins J.A., Lebrun M.-H., Dickman M.;
RT "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia
RT sclerotiorum and Botrytis cinerea.";
RL PLoS Genet. 7:E1002230-E1002230(2011).
CC -!- FUNCTION: Probable lysosomal cobalamin transporter. Required to export
CC cobalamin from lysosomes allowing its conversion to cofactors (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Lysosome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the LIMR family. LMBRD1 subfamily.
CC {ECO:0000305}.
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DR EMBL; CH476846; EDN28744.1; -; Genomic_DNA.
DR RefSeq; XP_001559707.1; XM_001559657.1.
DR AlphaFoldDB; A6RN41; -.
DR SMR; A6RN41; -.
DR PRIDE; A6RN41; -.
DR VEuPathDB; FungiDB:Bcin05g05370; -.
DR OMA; IITTFTW; -.
DR OrthoDB; 744771at2759; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031419; F:cobalamin binding; IEA:UniProtKB-KW.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR Pfam; PF04791; LMBR1; 1.
PE 3: Inferred from homology;
KW Cobalamin; Cobalt; Glycoprotein; Lysosome; Membrane; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..593
FT /note="Probable lysosomal cobalamin transporter"
FT /id="PRO_0000365828"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 46..66
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 94..114
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 144..164
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 195..215
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 312..332
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 349..369
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 419..439
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 506..526
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 237..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 564..593
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 243..260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 574
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 593 AA; 65522 MW; 17F88E1BC32CBC5B CRC64;
MALIQTAFIW VAYAVAVGIV ALIAAIFTYT YQTPRDRSAL VSTVTIITLT SLLATVLLLP
VDIALVSSTT SKLGAKKDWA TPETVHNILL TLKIVYYALY SFDAVLCLLV IPFTYFFYEE
YDEIDSEEGT QTFGQRFLSA AKYTLFFVAL VVILFLVGFF VPVAKNRGSD MDLDYFKRLL
AENHGERALT FALGLLISLG TLLYILYTSV GLALLPISFI KSAPSISAPQ LSETTASALE
QNRERQRQLE GRNAGRDGGL SAKDQRELEA LHREERTLVR RERLAAESRG DGKSFIVRAW
TKTCAIFRPL KLIGGILLLI LSLIIWVSML ITGIDKAKNS FCKQHCGYIL GSINIFQPIN
WIFVKSSIVF PIDYVLMALL VLFLFSSSVT GIAAIGLRFL WVKLFEIRKG HTSPQALLMA
TVMLTLIILA INYSIAMLIA PQYAIYGAQT FCANPTKFPG DQPDCSNHPE LIKTCSELSS
GEGAEKVCTP SVVSTFLNRV TVNFPFFGAL AFWAQFVFLA IFLIVFVTAL FRTPKLDLSE
IDEDAEADEE EGLLASTGRR FGATWQDIRG KTQNTSGGAA GRGIRGDDDH NDD