LMBD1_PYRTR
ID LMBD1_PYRTR Reviewed; 591 AA.
AC B2WCU2;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 25-MAY-2022, entry version 47.
DE RecName: Full=Probable lysosomal cobalamin transporter;
GN ORFNames=PTRG_07801;
OS Pyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot fungus)
OS (Drechslera tritici-repentis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae;
OC Pyrenophora.
OX NCBI_TaxID=426418;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pt-1C-BFP;
RX PubMed=23316438; DOI=10.1534/g3.112.004044;
RA Manning V.A., Pandelova I., Dhillon B., Wilhelm L.J., Goodwin S.B.,
RA Berlin A.M., Figueroa M., Freitag M., Hane J.K., Henrissat B., Holman W.H.,
RA Kodira C.D., Martin J., Oliver R.P., Robbertse B., Schackwitz W.,
RA Schwartz D.C., Spatafora J.W., Turgeon B.G., Yandava C., Young S., Zhou S.,
RA Zeng Q., Grigoriev I.V., Ma L.-J., Ciuffetti L.M.;
RT "Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-
RT repentis, reveals transduplication and the impact of repeat elements on
RT pathogenicity and population divergence.";
RL G3 (Bethesda) 3:41-63(2013).
CC -!- FUNCTION: Probable lysosomal cobalamin transporter. Required to export
CC cobalamin from lysosomes allowing its conversion to cofactors (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Lysosome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the LIMR family. LMBRD1 subfamily.
CC {ECO:0000305}.
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DR EMBL; DS231622; EDU50720.1; -; Genomic_DNA.
DR RefSeq; XP_001938133.1; XM_001938098.1.
DR AlphaFoldDB; B2WCU2; -.
DR SMR; B2WCU2; -.
DR STRING; 426418.B2WCU2; -.
DR EnsemblFungi; EDU50720; EDU50720; PTRG_07801.
DR GeneID; 6346075; -.
DR eggNOG; ENOG502QQ2T; Eukaryota.
DR HOGENOM; CLU_028341_1_0_1; -.
DR InParanoid; B2WCU2; -.
DR OMA; IITTFTW; -.
DR OrthoDB; 744771at2759; -.
DR Proteomes; UP000001471; Unassembled WGS sequence.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031419; F:cobalamin binding; IEA:UniProtKB-KW.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR Pfam; PF04791; LMBR1; 1.
PE 3: Inferred from homology;
KW Cobalamin; Cobalt; Lysosome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..591
FT /note="Probable lysosomal cobalamin transporter"
FT /id="PRO_0000365838"
FT TRANSMEM 8..28
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 39..59
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 95..115
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 144..164
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 198..218
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 315..335
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 378..398
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 422..442
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 509..529
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 238..266
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 591 AA; 65813 MW; 6CC727024434D17D CRC64;
MALIQTSLIW VAYAVAVAIL FLIASTFVYV YQKPRDRAAA VTIVCIFTTL ALLATVLLIP
VDVALVSSTS RSSLGRKKDW ATPDKVDSIV YTLRIVYYTL YSLDAVLCLL VIPFTYFWYE
EYDQDAAEHG EQTAAQRIGG ALKWTLGFLI FVVAIFLVGF FVPFAKQAKE DKRLDLDYFK
HLLSENHGER ALSFGLGFLI TVGTVLFVLY TGAGMALLPV AMIKSAPSVS APTLAANTAS
QLETNRERQR QLEGRNEGRE GGLDSRDRRE LEALVREERT LIRRERLAAE SSGEDRHWIV
KAWIKTEAFF RPLKLIGGLI LLVFALVIFA SMLITGIDKA KNSICGAHCG YILGHINIFQ
PLNWVLVKSA KVFPIDYVLF LLLVLFLFSA SVVGIATAGI RFLWVTIFKI RKGQTSPQAL
LMATVLLTLI TLAINYSVAM VVAPQYATWG PQTYCDMKTN SLDEQPDCAE HKDLIKPCSE
LATNPAAQQV CTPSVLSTFI NRVTINFPFF GIVLFWAQFA FLGVYLIVFL TTLFKAPTLD
QEQIDRDLEE EEDEGLLAST GRRFGAAWSD VTGRATKPAN YGATERDERI Q