LMN1_HYPDU
ID LMN1_HYPDU Reviewed; 646 AA.
AC A0A125S9M4;
DT 07-JUN-2017, integrated into UniProtKB/Swiss-Prot.
DT 13-APR-2016, sequence version 1.
DT 25-MAY-2022, entry version 18.
DE RecName: Full=Lamin-1 {ECO:0000303|PubMed:26840051};
OS Hypsibius dujardini (Water bear) (Macrobiotus dujardini).
OC Eukaryota; Metazoa; Ecdysozoa; Tardigrada; Eutardigrada; Parachela;
OC Hypsibioidea; Hypsibiidae; Hypsibius.
OX NCBI_TaxID=232323;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], IDENTIFICATION, SUBCELLULAR LOCATION, AND
RP DOMAIN.
RX PubMed=26840051; DOI=10.7554/elife.11117;
RA Hering L., Bouameur J.E., Reichelt J., Magin T.M., Mayer G.;
RT "Novel origin of lamin-derived cytoplasmic intermediate filaments in
RT tardigrades.";
RL Elife 5:E11117-E11117(2016).
CC -!- FUNCTION: Intermediate filament (IF) protein, component of the nuclear
CC lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear
CC membrane, which is thought to provide a framework for the nuclear
CC envelope (PubMed:26840051). {ECO:0000305|PubMed:26840051}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:26840051}.
CC Note=Localizes throughout the nucleoplasm (PubMed:26840051).
CC {ECO:0000269|PubMed:26840051}.
CC -!- DOMAIN: Contains an alpha-helical IF rod domain organization with three
CC coiled coil-forming segments (coil 1A, coil 1B, and coil 2)
CC (PubMed:26840051). {ECO:0000305|PubMed:26840051}.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000255|PROSITE-ProRule:PRU01188}.
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DR EMBL; KU295460; AME17870.1; -; mRNA.
DR AlphaFoldDB; A0A125S9M4; -.
DR SMR; A0A125S9M4; -.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1260; -; 1.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR001322; Lamin_tail_dom.
DR InterPro; IPR036415; Lamin_tail_dom_sf.
DR Pfam; PF00038; Filament; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF74853; SSF74853; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
DR PROSITE; PS51841; LTD; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Intermediate filament; Nucleus.
FT CHAIN 1..646
FT /note="Lamin-1"
FT /id="PRO_0000440214"
FT DOMAIN 90..446
FT /note="IF rod"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01188,
FT ECO:0000305|PubMed:26840051"
FT DOMAIN 504..618
FT /note="LTD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01187"
FT REGION 1..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1..85
FT /note="Head"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 86..126
FT /note="Coil 1A"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 127..137
FT /note="Linker 1"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 138..281
FT /note="Coil 1B"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 281..304
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 282..299
FT /note="Linker 2"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 300..439
FT /note="Coil 2"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 440..646
FT /note="Tail"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 476..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 457..471
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000305|PubMed:26840051"
FT COMPBIAS 40..91
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 281..303
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 476..512
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 646 AA; 71615 MW; E73574EF4F02AC92 CRC64;
MAEKAGEAGV QTRSRRNRST SREVSNGVAA PPAKATRSSQ LEAVAEQATP SSQQSQKSVR
TESSMSLGFN GGSSQGSRAT SPTSFSRAQE KEELQNLNDR LAKILNKLND SEEENRTLKI
RLTTVQQETS ADLNDQIGKY RDELERARKA VDAITQEKDR ELLAKDKALG ELNEHKAQFA
ALRKRLDELE ARLKAAEKAA RDKDNVLTEL KAQLAESETA GKRIQKELAD KTKQLDQARN
QIEQEVISRT NLENALKTAE EKAKFENNLL ESKLQRQSLS VTTVDHHSAQ STSRRSGSDF
SASVEDMRSA LEDAREEIQE NMDRMYGSKL EGLEVLSESQ KQTINGLNQA LTASRHDMKD
LQKENQQLRK KVGEVEKELH QQHQKFDQHK MDCTARIAAL SDQSNQASQQ YQALLEEYRT
TTHNNVEMRT ELEMYNKLLS DEEIRLGITS ADQYGGVRHG AKKRKLTETF YTTPFGSRSS
AGSRSAGHNS TPVTKSQVTR TTVKTSENKS KASGPVRILE VAPGKVVRLE NISEAVMQLG
HWRIHQHGAS GDAAFQFEKD QVIGGQSIIS VYSSTEDSQP NNGVTEIIAT NAWLADSHLE
TVLSDGDGNQ MATYEVSADS NLDIHNDSVR DSPRSAGKGI LGFFGL