LMN2_HYPDU
ID LMN2_HYPDU Reviewed; 614 AA.
AC A0A125S9M5;
DT 07-JUN-2017, integrated into UniProtKB/Swiss-Prot.
DT 13-APR-2016, sequence version 1.
DT 25-MAY-2022, entry version 21.
DE RecName: Full=Lamin-2 {ECO:0000303|PubMed:26840051};
DE Flags: Precursor;
OS Hypsibius dujardini (Water bear) (Macrobiotus dujardini).
OC Eukaryota; Metazoa; Ecdysozoa; Tardigrada; Eutardigrada; Parachela;
OC Hypsibioidea; Hypsibiidae; Hypsibius.
OX NCBI_TaxID=232323;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], IDENTIFICATION, SUBCELLULAR LOCATION,
RP ISOPRENYLATION AT CYS-611, AND DOMAIN.
RX PubMed=26840051; DOI=10.7554/elife.11117;
RA Hering L., Bouameur J.E., Reichelt J., Magin T.M., Mayer G.;
RT "Novel origin of lamin-derived cytoplasmic intermediate filaments in
RT tardigrades.";
RL Elife 5:E11117-E11117(2016).
CC -!- FUNCTION: Intermediate filament (IF) protein, component of the nuclear
CC lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear
CC membrane, which is thought to provide a framework for the nuclear
CC envelope (PubMed:26840051). {ECO:0000305|PubMed:26840051}.
CC -!- SUBCELLULAR LOCATION: Nucleus inner membrane; Lipid-anchor;
CC Nucleoplasmic side {ECO:0000269|PubMed:26840051}. Note=Localization is
CC restricted to the nuclear periphery which is consistent with the
CC presence of a C-terminal isoprenylation motif (PubMed:26840051).
CC {ECO:0000269|PubMed:26840051}.
CC -!- DOMAIN: Contains an alpha-helical IF rod domain organization with three
CC coiled coil-forming segments (coil 1A, coil 1B, and coil 2)
CC (PubMed:26840051). {ECO:0000305|PubMed:26840051}.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000255|PROSITE-ProRule:PRU01188}.
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DR EMBL; KU295461; AME17871.1; -; mRNA.
DR AlphaFoldDB; A0A125S9M5; -.
DR SMR; A0A125S9M5; -.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR GO; GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1260; -; 1.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR001322; Lamin_tail_dom.
DR InterPro; IPR036415; Lamin_tail_dom_sf.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF00932; LTD; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF74853; SSF74853; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
DR PROSITE; PS51841; LTD; 1.
PE 1: Evidence at protein level;
KW Coiled coil; Intermediate filament; Lipoprotein; Membrane; Nucleus;
KW Prenylation.
FT CHAIN 1..611
FT /note="Lamin-2"
FT /id="PRO_0000440215"
FT PROPEP 612..614
FT /note="Removed in mature form"
FT /evidence="ECO:0000305|PubMed:26840051"
FT /id="PRO_0000440216"
FT DOMAIN 81..433
FT /note="IF rod"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01188,
FT ECO:0000305|PubMed:26840051"
FT DOMAIN 462..581
FT /note="LTD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01187"
FT REGION 1..76
FT /note="Head"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 77..117
FT /note="Coil 1A"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 118..128
FT /note="Linker 1"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 129..268
FT /note="Coil 1B"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 269..286
FT /note="Linker 2"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 287..426
FT /note="Coil 2"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 427..611
FT /note="Tail"
FT /evidence="ECO:0000305|PubMed:26840051"
FT REGION 433..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 449..458
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000305|PubMed:26840051"
FT COMPBIAS 1..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT LIPID 611
FT /note="S-farnesyl cysteine"
FT /evidence="ECO:0000305|PubMed:26840051"
SQ SEQUENCE 614 AA; 69565 MW; 9F92BC162350F528 CRC64;
MSAQVSKKRG GSNPPKTGQH AASSTTSRTE SSATSQTIYE RQEVETRTQR TPGGLLLAAS
SAEVSSGTAG LAGSPLSRHQ EKEEFKLLNN RFANYIDTIR AQQEEISVLR RKVETVSSKE
VVENQKIKER YNLEIANLRR ALDEVSRDLA AAIIERDSLR PERDARLLLD NEKKTLQKRS
KDAEAALKDA KNQLAALRDQ AKDHDNEIHG LTTENSSLKL QIENLKKDLS QETNLRVDAE
NRLQSEREKN ALLEGIHNEE IVSLRNQRRT EITEVETRMG EEYQSKIVEQ LNDLRADLEA
VAHEMRLDLE RSYQNQLEDS QDLANRYRDE ARALLADLSA AQDRIKETQT RSEKQLQELR
LQLQRLQAEL NGKDDEVQRL QKLLADRQAE LQNTHHELSR QIASYQELLD EKIHLDAELA
TYNALLRTEE ERLNMKSPPF PSTPDSQRRG TKRRIADSYT RTRFRNEASA TGDIHISEID
AEGQFVRLEN KSGQDVVIGG WKLLMVSDNG EDNKTDYKIH SNQVIKAHSS TTIWSANTNV
VHEPPADIVM EGRWLVGDHT SVTLSTSDGV EVARREMTQS STRDDSYLGP SGLPKRSRLV
VADSSDHQKN CVIM