LOL1_ORYSJ
ID LOL1_ORYSJ Reviewed; 147 AA.
AC Q69UP7; A0A0P0X5I2;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=Protein LOL1;
DE AltName: Full=Protein LSD ONE LIKE 1;
DE Short=OsLOL1;
DE AltName: Full=Putative zinc finger LOL1;
GN Name=LOL1; OrderedLocusNames=Os07g0472200; ORFNames=P0675B10.121;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Putative zinc finger that may be involved in programmed cell
CC death and defense response. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP004347; BAD30674.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF21525.1; -; Genomic_DNA.
DR EMBL; AP014963; BAT01432.1; -; Genomic_DNA.
DR EMBL; AK061509; BAG87973.1; -; mRNA.
DR RefSeq; XP_015644598.1; XM_015789112.1.
DR AlphaFoldDB; Q69UP7; -.
DR PaxDb; Q69UP7; -.
DR PRIDE; Q69UP7; -.
DR EnsemblPlants; Os07t0472200-01; Os07t0472200-01; Os07g0472200.
DR GeneID; 4343203; -.
DR Gramene; Os07t0472200-01; Os07t0472200-01; Os07g0472200.
DR KEGG; osa:4343203; -.
DR HOGENOM; CLU_148319_0_0_1; -.
DR OrthoDB; 1870474at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR Genevisible; Q69UP7; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR040319; LSD1-like.
DR InterPro; IPR005735; Znf_LSD1.
DR PANTHER; PTHR31747; PTHR31747; 1.
DR Pfam; PF06943; zf-LSD1; 1.
DR TIGRFAMs; TIGR01053; LSD1; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..147
FT /note="Protein LOL1"
FT /id="PRO_0000408487"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 47..77
FT /note="Putative zinc finger"
FT COMPBIAS 23..38
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 147 AA; 15515 MW; CB017757A8E6C27C CRC64;
MVASRAPRSE SPWLKKPMHG VSGSTAMAST PWSSMPPSSH SLGAQSQLVC SGCRNLLMYP
AGATSICCAV CGTVTAVPAP EQKSSCNVHE NKERLKGNTN GFRAPQRCAR RVDGACTQVA
REVHTEVALV IFTLLCVTLP GLLFSLG