ID   LOL2_ORYSJ              Reviewed;         172 AA.
AC   Q2QMB3; A0A0P0YC51;
DT   31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   24-JAN-2006, sequence version 1.
DT   03-AUG-2022, entry version 80.
DE   RecName: Full=Protein LOL2;
DE   AltName: Full=Protein LSD ONE LIKE 2;
DE            Short=OsLOL2;
DE   AltName: Full=Putative zinc finger LOL2;
GN   Name=LOL2; OrderedLocusNames=Os12g0611000, LOC_Os12g41700;
GN   ORFNames=OsJ_36836;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG   The rice chromosomes 11 and 12 sequencing consortia;
RT   "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT   genes and recent gene duplications.";
RL   BMC Biol. 3:20-20(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Putative zinc finger that may be involved in programmed cell
CC       death and defense response. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR   EMBL; DP000011; ABA99369.1; -; Genomic_DNA.
DR   EMBL; AP008218; BAF30269.1; -; Genomic_DNA.
DR   EMBL; AP014968; BAT18036.1; -; Genomic_DNA.
DR   EMBL; CM000149; EEE53591.1; -; Genomic_DNA.
DR   EMBL; AK111837; BAG99442.1; -; mRNA.
DR   RefSeq; XP_015620418.1; XM_015764932.1.
DR   AlphaFoldDB; Q2QMB3; -.
DR   STRING; 4530.OS12T0611000-01; -.
DR   PaxDb; Q2QMB3; -.
DR   PRIDE; Q2QMB3; -.
DR   EnsemblPlants; Os12t0611000-01; Os12t0611000-01; Os12g0611000.
DR   GeneID; 4352767; -.
DR   Gramene; Os12t0611000-01; Os12t0611000-01; Os12g0611000.
DR   KEGG; osa:4352767; -.
DR   eggNOG; ENOG502QQTC; Eukaryota.
DR   HOGENOM; CLU_094017_0_0_1; -.
DR   InParanoid; Q2QMB3; -.
DR   OMA; PGMDIAH; -.
DR   OrthoDB; 1480977at2759; -.
DR   Proteomes; UP000000763; Chromosome 12.
DR   Proteomes; UP000007752; Chromosome 12.
DR   Proteomes; UP000059680; Chromosome 12.
DR   Genevisible; Q2QMB3; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   InterPro; IPR040319; LSD1-like.
DR   InterPro; IPR005735; Znf_LSD1.
DR   PANTHER; PTHR31747; PTHR31747; 1.
DR   Pfam; PF06943; zf-LSD1; 3.
DR   TIGRFAMs; TIGR01053; LSD1; 3.
PE   2: Evidence at transcript level;
KW   Nucleus; Reference proteome.
FT   CHAIN           1..172
FT                   /note="Protein LOL2"
FT                   /id="PRO_0000408488"
FT   REGION          4..34
FT                   /note="Putative zinc finger 1"
FT   REGION          44..74
FT                   /note="Putative zinc finger 2"
FT   REGION          82..112
FT                   /note="Putative zinc finger 3"
SQ   SEQUENCE   172 AA;  18054 MW;  666AF8A71FC96085 CRC64;
     MQSQIVCHGC RNILLYPRGA PSVCCAVCHA VSSTAPSPGM DIAHLICGGC RTLLMYTRNA
     TSVRCSCCDT VNLVRPVSSI AHLNCGQCQT VLMYPYGAPS VKCAICNFIT NTGMNTMRHL
     PPNGTSYTAP STSAPTTQSQ NVTVVVENPM TVDAKGKLVS NVVVGVTTGG KK