ID   LOL3_ORYSJ              Reviewed;         186 AA.
AC   Q6ASS2; A0A0P0W1F7;
DT   31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   13-SEP-2004, sequence version 1.
DT   03-AUG-2022, entry version 88.
DE   RecName: Full=Protein LOL3;
DE   AltName: Full=Protein LSD ONE LIKE 3;
DE            Short=OsLOL3;
DE   AltName: Full=Putative zinc finger LOL3;
GN   Name=LOL3; OrderedLocusNames=Os03g0639600, LOC_Os03g43840;
GN   ORFNames=B1394A07.19, OsJ_11851, OSJNBb0029I19.1;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16109971; DOI=10.1101/gr.3869505;
RG   The rice chromosome 3 sequencing consortium;
RA   Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA   Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA   Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA   Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA   Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA   Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA   Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA   Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA   Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA   Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA   O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA   Jin W., Lee H.R., Jiang J., Jackson S.;
RT   "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT   and diverged grass species.";
RL   Genome Res. 15:1284-1291(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Putative zinc finger that may be involved in programmed cell
CC       death and defense response. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR   EMBL; AC128646; AAT77863.1; -; Genomic_DNA.
DR   EMBL; AC147427; AAT85277.1; -; Genomic_DNA.
DR   EMBL; DP000009; ABF97818.1; -; Genomic_DNA.
DR   EMBL; AP008209; BAF12651.1; -; Genomic_DNA.
DR   EMBL; AP014959; BAS85419.1; -; Genomic_DNA.
DR   EMBL; CM000140; EEE59562.1; -; Genomic_DNA.
DR   EMBL; AK111569; BAG99311.1; -; mRNA.
DR   RefSeq; XP_015628086.1; XM_015772600.1.
DR   AlphaFoldDB; Q6ASS2; -.
DR   STRING; 4530.OS03T0639600-01; -.
DR   PaxDb; Q6ASS2; -.
DR   PRIDE; Q6ASS2; -.
DR   EnsemblPlants; Os03t0639600-01; Os03t0639600-01; Os03g0639600.
DR   GeneID; 4333536; -.
DR   Gramene; Os03t0639600-01; Os03t0639600-01; Os03g0639600.
DR   KEGG; osa:4333536; -.
DR   eggNOG; ENOG502QQTC; Eukaryota.
DR   HOGENOM; CLU_094017_0_0_1; -.
DR   InParanoid; Q6ASS2; -.
DR   OMA; PHAHAGM; -.
DR   OrthoDB; 1480977at2759; -.
DR   Proteomes; UP000000763; Chromosome 3.
DR   Proteomes; UP000007752; Chromosome 3.
DR   Proteomes; UP000059680; Chromosome 3.
DR   Genevisible; Q6ASS2; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   InterPro; IPR040319; LSD1-like.
DR   InterPro; IPR005735; Znf_LSD1.
DR   PANTHER; PTHR31747; PTHR31747; 1.
DR   Pfam; PF06943; zf-LSD1; 3.
DR   TIGRFAMs; TIGR01053; LSD1; 3.
PE   2: Evidence at transcript level;
KW   Nucleus; Reference proteome.
FT   CHAIN           1..186
FT                   /note="Protein LOL3"
FT                   /id="PRO_0000408489"
FT   REGION          4..34
FT                   /note="Putative zinc finger 1"
FT   REGION          45..75
FT                   /note="Putative zinc finger 2"
FT   REGION          83..113
FT                   /note="Putative zinc finger 3"
FT   REGION          120..157
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        120..139
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   186 AA;  19467 MW;  5A7E00497E0FFE5D CRC64;
     MQSQIVCHGC RSVLRYPSGA PSVCCALCQA ITTVPPPAPV MEMAHLICGG CRTLLMYTRN
     ADTVRCSCCS TVNLVRPVNN IAHVSCGQCR TTLMYPYGAP SVKCAICHYI TNTGMNTVAP
     TPSPMPTSSG SSYNAPPSGS SYNAPPPTSA PTSRPQNVTV VVENPMTVDE KGKLVSNVVV
     GVTTGK