LOR2_ARATH
ID LOR2_ARATH Reviewed; 217 AA.
AC Q8LG32; Q682U5; Q9S7P7;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2010, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Protein LURP-one-related 2;
GN OrderedLocusNames=At1g53870; ORFNames=T18A20.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Might be related to the phospholipid scramblase and tubby-
CC like superfamily of membrane tethered transcription factors.
CC {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q8LG32-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8LG32-2; Sequence=VSP_039832, VSP_039833;
CC -!- SIMILARITY: Belongs to the LOR family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF02866.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=AAM61058.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC009324; AAF02866.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE33012.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33013.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM58534.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM58535.1; -; Genomic_DNA.
DR EMBL; AY084488; AAM61058.1; ALT_INIT; mRNA.
DR EMBL; BT024598; ABD42996.1; -; mRNA.
DR PIR; H96578; H96578.
DR RefSeq; NP_001031184.1; NM_001036107.3. [Q8LG32-2]
DR RefSeq; NP_001319216.1; NM_001333613.1. [Q8LG32-1]
DR RefSeq; NP_001319217.1; NM_001333617.1. [Q8LG32-1]
DR RefSeq; NP_001320314.1; NM_001333618.1. [Q8LG32-2]
DR RefSeq; NP_001320961.1; NM_001333614.1. [Q8LG32-2]
DR RefSeq; NP_564642.1; NM_104264.2. [Q8LG32-1]
DR RefSeq; NP_564645.1; NM_104267.2. [Q8LG32-1]
DR RefSeq; NP_974021.1; NM_202292.3. [Q8LG32-2]
DR AlphaFoldDB; Q8LG32; -.
DR SMR; Q8LG32; -.
DR PaxDb; Q8LG32; -.
DR PRIDE; Q8LG32; -.
DR EnsemblPlants; AT1G53870.1; AT1G53870.1; AT1G53870.
DR EnsemblPlants; AT1G53870.2; AT1G53870.2; AT1G53870. [Q8LG32-2]
DR EnsemblPlants; AT1G53870.3; AT1G53870.3; AT1G53870.
DR EnsemblPlants; AT1G53870.4; AT1G53870.4; AT1G53870. [Q8LG32-2]
DR EnsemblPlants; AT1G53890.1; AT1G53890.1; AT1G53890.
DR EnsemblPlants; AT1G53890.2; AT1G53890.2; AT1G53890. [Q8LG32-2]
DR EnsemblPlants; AT1G53890.4; AT1G53890.4; AT1G53890.
DR EnsemblPlants; AT1G53890.5; AT1G53890.5; AT1G53890. [Q8LG32-2]
DR GeneID; 841824; -.
DR GeneID; 841827; -.
DR Gramene; AT1G53870.1; AT1G53870.1; AT1G53870.
DR Gramene; AT1G53870.2; AT1G53870.2; AT1G53870. [Q8LG32-2]
DR Gramene; AT1G53870.3; AT1G53870.3; AT1G53870.
DR Gramene; AT1G53870.4; AT1G53870.4; AT1G53870. [Q8LG32-2]
DR Gramene; AT1G53890.1; AT1G53890.1; AT1G53890.
DR Gramene; AT1G53890.2; AT1G53890.2; AT1G53890. [Q8LG32-2]
DR Gramene; AT1G53890.4; AT1G53890.4; AT1G53890.
DR Gramene; AT1G53890.5; AT1G53890.5; AT1G53890. [Q8LG32-2]
DR KEGG; ath:AT1G53870; -.
DR KEGG; ath:AT1G53890; -.
DR Araport; AT1G53870; -.
DR TAIR; locus:2197036; AT1G53870.
DR HOGENOM; CLU_063146_2_1_1; -.
DR InParanoid; Q8LG32; -.
DR OMA; AKVHPNK; -.
DR OrthoDB; 1172035at2759; -.
DR PhylomeDB; Q8LG32; -.
DR PRO; PR:Q8LG32; -.
DR Proteomes; UP000006548; Chromosome 1.
DR Genevisible; Q8LG32; AT.
DR Gene3D; 2.40.160.200; -; 1.
DR InterPro; IPR007612; LOR.
DR InterPro; IPR038595; LOR_sf.
DR InterPro; IPR025659; Tubby-like_C.
DR PANTHER; PTHR31087; PTHR31087; 1.
DR Pfam; PF04525; LOR; 1.
DR SUPFAM; SSF54518; SSF54518; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..217
FT /note="Protein LURP-one-related 2"
FT /id="PRO_0000399234"
FT VAR_SEQ 195..202
FT /note="EPQLDHSL -> VILKVSMF (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_039832"
FT VAR_SEQ 203..217
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_039833"
FT CONFLICT 156
FT /note="R -> H (in Ref. 3; AAM61058)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 217 AA; 24904 MW; A73BC8ABEEA43E03 CRC64;
MQIYNPISPV KTMVKIYPHL AFPVDMDVVQ DKILPYLTTE QERFTIWMKS LVFNSKGCTV
FDSKGNLIYR VDNYDSKSWS NEVYFMDLNG KILFTLRQKK LGFFKSWEGY NSTGTRFRLR
KIFKILPRES SSSYKVVMGS RIVDGDQQSC YKIVNRGSVF AIKDGSGRLM AEVKNKLSDI
SGLDLGDDVL TMMVEPQLDH SLIMGIVIAY KLTKCKL
