LPTD_ALCBS
ID LPTD_ALCBS Reviewed; 759 AA.
AC Q0VMV5;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN OrderedLocusNames=ABO_2045;
OS Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 /
OS SK2).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC Alcanivoracaceae; Alcanivorax.
OX NCBI_TaxID=393595;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2;
RX PubMed=16878126; DOI=10.1038/nbt1232;
RA Schneiker S., Martins dos Santos V.A.P., Bartels D., Bekel T., Brecht M.,
RA Buhrmester J., Chernikova T.N., Denaro R., Ferrer M., Gertler C.,
RA Goesmann A., Golyshina O.V., Kaminski F., Khachane A.N., Lang S., Linke B.,
RA McHardy A.C., Meyer F., Nechitaylo T., Puehler A., Regenhardt D., Rupp O.,
RA Sabirova J.S., Selbitschka W., Yakimov M.M., Timmis K.N., Vorhoelter F.-J.,
RA Weidner S., Kaiser O., Golyshin P.N.;
RT "Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium
RT Alcanivorax borkumensis.";
RL Nat. Biotechnol. 24:997-1004(2006).
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000255|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
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DR EMBL; AM286690; CAL17493.1; -; Genomic_DNA.
DR RefSeq; WP_011589324.1; NC_008260.1.
DR AlphaFoldDB; Q0VMV5; -.
DR SMR; Q0VMV5; -.
DR STRING; 393595.ABO_2045; -.
DR EnsemblBacteria; CAL17493; CAL17493; ABO_2045.
DR KEGG; abo:ABO_2045; -.
DR eggNOG; COG1452; Bacteria.
DR HOGENOM; CLU_009039_0_0_6; -.
DR OMA; DYSHLDW; -.
DR OrthoDB; 100018at2; -.
DR Proteomes; UP000008871; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR Pfam; PF04453; LptD; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Membrane; Reference proteome; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT CHAIN 23..759
FT /note="LPS-assembly protein LptD"
FT /id="PRO_0000281586"
SQ SEQUENCE 759 AA; 86636 MW; 85CBF5B4647BC0FC CRC64;
MPLPIPRLLI PALLLASGAS LAENDLNWVD REQMATFPAV QQREIPDWCA GIYYNPHVGM
PVEGSDTVIT ADHSTLTQDG LIKLDGDVLI EQPGRRITTD IAELDQATGK FELENGMRME
SDQATFIAEN MSGQTRRKEG SLQGVRYSLF DTSARGSANY IFLKQNTTTI THGTYTTCAP
GSNGWVMQGD RIFLDRDKGW GEANNVVLKV KSVPIFWLPW MTFPIDDRRK SGLLFPTLSV
GDSSGLDISQ PIYLNLHPQL DATISPRYID GRGSGLDSEM RYLSRWGEGS LSYGVLFNDR
KFDNENRQVG RWTHNGDINR WSLETDFTYV SDDFYFKDLD TGLEISSQTH LPRLGEARYY
GRTWQVLGRL QSWQTIDPTL DDADLPYRRL PQLQLTGDPT LVGPVKGLWL SDITAFGRSD
SDDSGKATGL RGHMAPALTM RLQNSWGYVE PRARLYHTQY RLDSVDANEE DNPDLTTWGA
SLDSGLFFER AGNWFGSSFT QTLEPRLFLN KVAYEDQSEL PNFDSGELTF SYNSLFRENR
FIGYDRIGDE EKLAVGLTSR FLHDGTGREQ LRLRVAQGFY FEDRKVVTER AVEDPTDDQT
PVIGDARWNF AQDWYLYSEG QWDIEENKRE RSNFQIGYND RERRVVNVGY HDRPADSIRE
SEVSAILPVH RHWRLIGRWM YDLDNQRSLE TMAGTEYRNC CWKLRLLSQR ELMDDNGDGN
LEADSTIWFQ IQMIGLGGFG GQVDSLLERS IPGYRRQYD
