LPTD_BURCM
ID LPTD_BURCM Reviewed; 786 AA.
AC Q0BC04;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN OrderedLocusNames=Bamb_2763;
OS Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia
OS (strain AMMD)).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
OX NCBI_TaxID=339670;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-244 / AMMD;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Pitluck S., Bruce D., Chain P.,
RA Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Parke J., Coenye T., Konstantinidis K.,
RA Ramette A., Tiedje J., Richardson P.;
RT "Complete sequence of chromosome 1 of Burkholderia cepacia AMMD.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000255|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
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DR EMBL; CP000440; ABI88319.1; -; Genomic_DNA.
DR RefSeq; WP_011657885.1; NZ_CP009798.1.
DR AlphaFoldDB; Q0BC04; -.
DR SMR; Q0BC04; -.
DR STRING; 339670.Bamb_2763; -.
DR PRIDE; Q0BC04; -.
DR EnsemblBacteria; ABI88319; ABI88319; Bamb_2763.
DR GeneID; 44693425; -.
DR GeneID; 60995637; -.
DR KEGG; bam:Bamb_2763; -.
DR PATRIC; fig|339670.21.peg.2130; -.
DR eggNOG; COG1452; Bacteria.
DR OMA; DYSHLDW; -.
DR Proteomes; UP000000662; Chromosome 1.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR Pfam; PF04453; LptD; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Membrane; Signal.
FT SIGNAL 1..39
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT CHAIN 40..786
FT /note="LPS-assembly protein LptD"
FT /id="PRO_5000127631"
SQ SEQUENCE 786 AA; 86882 MW; 0D7172DDDE6D75FE CRC64;
MPPKPLFPNV FPGDGAPRKR RLALALLAVP GLVPAVSYAQ LSGAAAQPQP LDSPWDLRLA
PQLEDHPLKD GAKPAAFVIA DHTSGTAEQD LAAKGSAELR RGDAVVKADA LHYDQDTDMA
DAYGQVRVIN GGTSFAGPEA HLKVEANQGF MTAPKYHFNV TGGSGSAERV DLLDSERSVF
VNGTYTACQC ATDPAWYIKG SRFDFDTGAD EGTARNGVLF FQGVPIFASP WLTFPLSGER
RSGLLPPTFS LNSNNGFELT LPYYFNIAPN RDLTITPRII SRRGVQTEAS FRYLSPTYSG
TLTANYLPDD RLAHRNRYAI YWQHQQNFGG GFGGYVYFNK VSDNTYPEDL GSTNEFINGT
QTLYQQEAGL TYNNGPWSVL ARYQHWQTLP PSIAPYSREP QLNVKYTKYN VGGFDFGAEA
DYSRFRITTA DATEGDRIVF NPYIAYGVYG PGYFVVPKVQ YHFASYDLNY LSSSTPNSPK
RFTESIPTVS FDTGLIFDRS VRLFGQDFIQ TLEPRLYYVY TPYRDQSNAP LFDTAESDFG
LAEIYQPNTF VGNDRIADAN RITAGLTSRF IDPRTGDERA RFVIAQQYYF ANQRVTLNSV
QAPVQARHSD LIVGAALKLG SGFMSETAFQ YNQNNNQLVK SSIGFGFSPG ERRVINVGYR
YTRANTTLDN QPINQFLVSA QWPLTRRLYA VGRFNYDLAA NRVVDGLLGL QYDADCWALG
VGAQRFANGV NSSGQQNSST RFMMQLTLKG LSSIDNGLVA AFRAGVPGYT ALPSAPPPMS
RFSNYE
