ID   LPTD_DECAR              Reviewed;         849 AA.
AC   Q479U3;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   13-SEP-2005, sequence version 1.
DT   25-MAY-2022, entry version 81.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=Daro_3659;
OS   Dechloromonas aromatica (strain RCB).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Azonexaceae;
OC   Dechloromonas.
OX   NCBI_TaxID=159087;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RCB;
RX   PubMed=19650930; DOI=10.1186/1471-2164-10-351;
RA   Salinero K.K., Keller K., Feil W.S., Feil H., Trong S., Di Bartolo G.,
RA   Lapidus A.;
RT   "Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB:
RT   indications of a surprisingly complex life-style and cryptic anaerobic
RT   pathways for aromatic degradation.";
RL   BMC Genomics 10:351-351(2009).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; CP000089; AAZ48388.1; -; Genomic_DNA.
DR   RefSeq; WP_011289384.1; NC_007298.1.
DR   AlphaFoldDB; Q479U3; -.
DR   SMR; Q479U3; -.
DR   STRING; 159087.Daro_3659; -.
DR   EnsemblBacteria; AAZ48388; AAZ48388; Daro_3659.
DR   KEGG; dar:Daro_3659; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_0_0_4; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   Pfam; PF04453; LptD; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Signal.
FT   SIGNAL          1..25
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           26..849
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_5000100355"
SQ   SEQUENCE   849 AA;  94970 MW;  83F7847B266877F8 CRC64;
     MPGFSRRPLA VFVCCLFAGV QTGHAAADIE RAMVQGESTA PAAERSVAMQ LAAVSELPLN
     LRKERKFDVL GKKKQPAEPV APMLAPEKPI ELKKDDAYPL FIVADQIEGQ ADELTEAEGD
     VELRKVGTLI YADRLTYRPL EDEVEATGSV RMLQDGAEIS GPHMRMKLAD QIGSAEQVTY
     HIVKEVPSRF YAPQQTVVTV ASSNATNSGA PMMLNVSNSY GLPTQLPPPR PSEANGYAER
     VEFEGENQMT LFSNTYSTCK PGQADWYMKS SETHLDYDRS EGTARNATLW FGGVPIVYTP
     VAGFPLSTQR RSGILHPHFS ASTRSGLDIS VPYYLNLAPN YDLTLVPRYM SKRGMQLGAD
     ARYVDYFYEG EARFEYLPND EMLGRSRYGY RFEHRHNLGQ GVSAALNWNG VSDDLYWQDL
     SSRLLQTSQA QLPRQVSLGY SPSPWLQSNL QVLRYQTLQI DPNNPVTRPY FLEPQLNLVG
     YKPNIWKTDF SMVGQFSRFT HVDAGKVQGD RMVFYPQLSL PIVHPAFQIT PKIGLHMTKY
     TLDQQAAGLP ESISRVLPTF SLDSTVILER EGDWFGRGYI QTLEPRLYYV NIPYKDQSQI
     PLFDSGLSDF NFAQIFSENR YSGYDRINDA NQLTAALTTR LLDGETGVER LKAMVGQRYY
     FKPQRVAITG ETTRQNDFSN LVAAVNGLVA PKTYADVAWE YNYRENISER FSAGVRFQPE
     LGKVMSASYR YTRDPLTTLS TVDQVDIAGQ WPISANWYAV GRYNYSLRDK RVLESIAGVE
     YNAGCWAVRL VGQHLGAISG AANDTVFFQL ELNDFGSIGS NPIGLLRRSI PGYGKINELP
     TSSSLLTSQ