LPTD_POLSJ
ID LPTD_POLSJ Reviewed; 822 AA.
AC Q121Q3;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN OrderedLocusNames=Bpro_4863;
OS Polaromonas sp. (strain JS666 / ATCC BAA-500).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas; unclassified Polaromonas.
OX NCBI_TaxID=296591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JS666 / ATCC BAA-500;
RX PubMed=18723656; DOI=10.1128/aem.00197-08;
RA Mattes T.E., Alexander A.K., Richardson P.M., Munk A.C., Han C.S.,
RA Stothard P., Coleman N.V.;
RT "The genome of Polaromonas sp. strain JS666: insights into the evolution of
RT a hydrocarbon- and xenobiotic-degrading bacterium, and features of
RT relevance to biotechnology.";
RL Appl. Environ. Microbiol. 74:6405-6416(2008).
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000255|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000316; ABE46739.1; -; Genomic_DNA.
DR RefSeq; WP_011485724.1; NC_007948.1.
DR AlphaFoldDB; Q121Q3; -.
DR SMR; Q121Q3; -.
DR STRING; 296591.Bpro_4863; -.
DR EnsemblBacteria; ABE46739; ABE46739; Bpro_4863.
DR KEGG; pol:Bpro_4863; -.
DR eggNOG; COG1452; Bacteria.
DR HOGENOM; CLU_009039_0_0_4; -.
DR OMA; DYSHLDW; -.
DR OrthoDB; 100018at2; -.
DR Proteomes; UP000001983; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR Pfam; PF04453; LptD; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Membrane; Reference proteome; Signal.
FT SIGNAL 1..37
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT CHAIN 38..822
FT /note="LPS-assembly protein LptD"
FT /id="PRO_5000117340"
FT REGION 38..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 822 AA; 91327 MW; CE07F7C6B209035F CRC64;
MRRASRSPFI LSPVAHAVSR LVLCATLGWT YAGSGHAQVP APAGGSEVPL GARPPASAPV
AAQQETPLKL KSSPALAEEV PNGPGDEGPT FVFGDSVSGR PNLETVIDGN AELRRGATSI
RADRIEYYQP EDRVKSRGNV RINNAGNRFE GPELEITLDR FEGFFTQPRY RFLSNGGNGQ
AERVDFIDDK HLTAHRASYT TCERDNEASW KPAWELRARS FEFDFDEEVG VANGAVLRFK
NVPILGFPKF SFPLSDKRKS GLLPPTLNMS SVNGFEVRQP YYFDIAPNRD ATFSPAIMTK
RGVDLAGEFR YLEPTYKGEL RANILPGDKL RNRDRWSYGY QHSGTIDSGL SAIGNLGVNL
NLSRVSDNDY WRDFPIASNS TTQRLLAQDA TVSWNRGFFA AAVRTLKWQT LQDLSAPIVP
PYDRLPQFTA NYTRVDAPLL GLGRGFDWSV EGDYTRFSAD RTLTGQPNSN RAFTRAQLSH
PWLSPAGFIT PKMQLHATSY QFDAPLVNGA RSASRTVPTF SLDSGLQFER QAGFLGRSFT
QTLEPRAFYV RTPYRDQSLL PNYDSGANDF NFATVFTENA FVGNDRISDA NLLTLGVTSR
LLDPATGAEA VRVGVAQRLR FADQRVTLPG ALPITDRISD LLVGASVNWV PQWSFDSTVQ
YNPKTKQSER SSIGVRYNPG NYRVISAAYR RQRNISEQID VGWQWPLNDL WGDKGRDLGA
GQGQGGGRYY AVGRLNYSVP DRKLVDAIVG VEYDGCCWIG RVVLQRTQNG TATSDTRILF
QLELVGFSRI GANPLETLKS NVPRYQYLRE KINTPSRFTT YD