LPTD_PSEE4
ID LPTD_PSEE4 Reviewed; 944 AA.
AC Q1IG17;
DT 20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2006, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN OrderedLocusNames=PSEEN0431;
OS Pseudomonas entomophila (strain L48).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=384676;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=L48;
RX PubMed=16699499; DOI=10.1038/nbt1212;
RA Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C.,
RA Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P.,
RA Weissenbach J., Lemaitre B., Medigue C., Boccard F.;
RT "Complete genome sequence of the entomopathogenic and metabolically
RT versatile soil bacterium Pseudomonas entomophila.";
RL Nat. Biotechnol. 24:673-679(2006).
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000255|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
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DR EMBL; CT573326; CAK13385.1; -; Genomic_DNA.
DR RefSeq; WP_011531842.1; NC_008027.1.
DR AlphaFoldDB; Q1IG17; -.
DR SMR; Q1IG17; -.
DR STRING; 384676.PSEEN0431; -.
DR PRIDE; Q1IG17; -.
DR EnsemblBacteria; CAK13385; CAK13385; PSEEN0431.
DR KEGG; pen:PSEEN0431; -.
DR eggNOG; COG1452; Bacteria.
DR HOGENOM; CLU_009039_1_0_6; -.
DR OMA; DYSHLDW; -.
DR OrthoDB; 100018at2; -.
DR Proteomes; UP000000658; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR InterPro; IPR005653; OstA-like_N.
DR Pfam; PF04453; LptD; 1.
DR Pfam; PF03968; LptD_N; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Membrane; Signal.
FT SIGNAL 1..33
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT CHAIN 34..944
FT /note="LPS-assembly protein LptD"
FT /id="PRO_0000281625"
FT REGION 52..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 944 AA; 106720 MW; 39DFAADDB85F5037 CRC64;
MALKSPAFRR KFPLLVTGGL LALQPLATSF VVAAEQFDCQ VSAAGGWDCK PKATGNLPPR
PVHPGAAAAS SGAEAPGEVG EAQAEKPMLV TESKGRGLKS RSEDYSHLDW VPREKLTAAQ
LAETGPYCGG AYIEPTRPGM NDTTPKDESP TYINAKVSKY QQEQQIATLA GDVVMRQGSM
QAEADEANLY QAENRGELKG NVKIRDNGSL VVGDEAQIQL DTGEARVDNA EYVMHKSHIR
GNALYAKRAE NAIIRLKDGT YTTCEPGSNA WQLKGNNITL NPATGFGTAT NVTLRVKDFP
VLYTPYIYFP IDDRRQSGFL PPSFSTSSDT GFMLVTPYYF NLAPNYDATL YPRYMAKRGM
LMEGEFRYLT KSSEGQFGGA YLNDESDDRK LQTDYKKERW MVNWQHKGGL DERLMTEVDY
TDISDPFYFQ DLETDQIGVE KRDFVNQQGA LNYRGDNYTA RLNVHAYEMA TISQITPYDK
LPQVTFNGTL PFHPSGLDFG YETEAVRFER DLKNDLVFDK DGKPDESIGV VKDANGEVIG
GRRIDESLRG IARANGTRLN AAPSISLPME ASYGFLTPKL KYVYTHYDLD LNSRGQAQAA
QDSANPAYGT YNSAINRNVP IFSVDSGLYF DRNTQLFGTN YRQTLEPRLF YLYVPYKDQR
DIPLFDTGET LFNYASLFRD NRFAGTDRIG DENKLSLGVT NRWIEDNGFQ RQRFSIGQAY
YFKDRKVQLP GIDYRTRKDS QSDVSPYALE YEYAFNRDWR FNSDFNWDPD SRSTRSGSAM
FHYQPEDNPN KIVNLGYRYR NDTITYDSLT GAWKVGGGDY GSPGDANYIK DYYKIQQHDF
SVIWPIVPQW SVIARWQHDY NRNRTLEAMG GFEYDSCCWK LRLINRYWLD YDDFSQATPT
NEKGDHGVFL QVVLKGLGGV VGNKVESFLD QGIQGYRTRE EQAY