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LPTD_PSEE4
ID   LPTD_PSEE4              Reviewed;         944 AA.
AC   Q1IG17;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   13-JUN-2006, sequence version 1.
DT   25-MAY-2022, entry version 87.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=PSEEN0431;
OS   Pseudomonas entomophila (strain L48).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=384676;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=L48;
RX   PubMed=16699499; DOI=10.1038/nbt1212;
RA   Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C.,
RA   Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P.,
RA   Weissenbach J., Lemaitre B., Medigue C., Boccard F.;
RT   "Complete genome sequence of the entomopathogenic and metabolically
RT   versatile soil bacterium Pseudomonas entomophila.";
RL   Nat. Biotechnol. 24:673-679(2006).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; CT573326; CAK13385.1; -; Genomic_DNA.
DR   RefSeq; WP_011531842.1; NC_008027.1.
DR   AlphaFoldDB; Q1IG17; -.
DR   SMR; Q1IG17; -.
DR   STRING; 384676.PSEEN0431; -.
DR   PRIDE; Q1IG17; -.
DR   EnsemblBacteria; CAK13385; CAK13385; PSEEN0431.
DR   KEGG; pen:PSEEN0431; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_1_0_6; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   Proteomes; UP000000658; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Signal.
FT   SIGNAL          1..33
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           34..944
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000281625"
FT   REGION          52..102
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   944 AA;  106720 MW;  39DFAADDB85F5037 CRC64;
     MALKSPAFRR KFPLLVTGGL LALQPLATSF VVAAEQFDCQ VSAAGGWDCK PKATGNLPPR
     PVHPGAAAAS SGAEAPGEVG EAQAEKPMLV TESKGRGLKS RSEDYSHLDW VPREKLTAAQ
     LAETGPYCGG AYIEPTRPGM NDTTPKDESP TYINAKVSKY QQEQQIATLA GDVVMRQGSM
     QAEADEANLY QAENRGELKG NVKIRDNGSL VVGDEAQIQL DTGEARVDNA EYVMHKSHIR
     GNALYAKRAE NAIIRLKDGT YTTCEPGSNA WQLKGNNITL NPATGFGTAT NVTLRVKDFP
     VLYTPYIYFP IDDRRQSGFL PPSFSTSSDT GFMLVTPYYF NLAPNYDATL YPRYMAKRGM
     LMEGEFRYLT KSSEGQFGGA YLNDESDDRK LQTDYKKERW MVNWQHKGGL DERLMTEVDY
     TDISDPFYFQ DLETDQIGVE KRDFVNQQGA LNYRGDNYTA RLNVHAYEMA TISQITPYDK
     LPQVTFNGTL PFHPSGLDFG YETEAVRFER DLKNDLVFDK DGKPDESIGV VKDANGEVIG
     GRRIDESLRG IARANGTRLN AAPSISLPME ASYGFLTPKL KYVYTHYDLD LNSRGQAQAA
     QDSANPAYGT YNSAINRNVP IFSVDSGLYF DRNTQLFGTN YRQTLEPRLF YLYVPYKDQR
     DIPLFDTGET LFNYASLFRD NRFAGTDRIG DENKLSLGVT NRWIEDNGFQ RQRFSIGQAY
     YFKDRKVQLP GIDYRTRKDS QSDVSPYALE YEYAFNRDWR FNSDFNWDPD SRSTRSGSAM
     FHYQPEDNPN KIVNLGYRYR NDTITYDSLT GAWKVGGGDY GSPGDANYIK DYYKIQQHDF
     SVIWPIVPQW SVIARWQHDY NRNRTLEAMG GFEYDSCCWK LRLINRYWLD YDDFSQATPT
     NEKGDHGVFL QVVLKGLGGV VGNKVESFLD QGIQGYRTRE EQAY
 
 
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