ID   LPTD_PSESM              Reviewed;         927 AA.
AC   Q88A43;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   20-MAR-2007, sequence version 2.
DT   25-MAY-2022, entry version 91.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=PSPTO_0554;
OS   Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-871 / DC3000;
RX   PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA   Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA   Gwinn M.L., Dodson R.J., DeBoy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Daugherty S.C., Brinkac L.M., Beanan M.J., Haft D.H., Nelson W.C.,
RA   Davidsen T.M., Zafar N., Zhou L., Liu J., Yuan Q., Khouri H.M.,
RA   Fedorova N.B., Tran B., Russell D., Berry K.J., Utterback T.R.,
RA   Van Aken S.E., Feldblyum T.V., D'Ascenzo M., Deng W.-L., Ramos A.R.,
RA   Alfano J.R., Cartinhour S., Chatterjee A.K., Delaney T.P., Lazarowitz S.G.,
RA   Martin G.B., Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M.,
RA   Collmer A.;
RT   "The complete genome sequence of the Arabidopsis and tomato pathogen
RT   Pseudomonas syringae pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAO54096.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AE016853; AAO54096.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; NP_790401.1; NC_004578.1.
DR   RefSeq; WP_046463957.1; NC_004578.1.
DR   AlphaFoldDB; Q88A43; -.
DR   SMR; Q88A43; -.
DR   STRING; 223283.PSPTO_0554; -.
DR   EnsemblBacteria; AAO54096; AAO54096; PSPTO_0554.
DR   GeneID; 1182164; -.
DR   KEGG; pst:PSPTO_0554; -.
DR   PATRIC; fig|223283.9.peg.564; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_1_0_6; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   Proteomes; UP000002515; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           23..927
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000281628"
FT   REGION          60..100
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        66..90
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   927 AA;  104556 MW;  F9DECB189EE74BCC CRC64;
     MALKSPAFRK KFPLLVTGSL LAMQPLATQF VVAAEQYDCS VSASGAWNCA PKSTAAAVEL
     PPRPVHSTAS VSSNGTVTSE SSSSGEQVAG PQLVTEAKGK GLKSRSADYS HLDWVPREKL
     TAAQLAETGP YCSGAYVEPI RPGMDDKTPM KDAPMFVGAK ASRYEQEAQV ATLAGDVVLR
     QGSMQVQAQE AALHQAENRG ELNGDVRLRD NGALIVGDKA ELQLDTGEAR VDNAEYVLHK
     SNIRGNALYA KRAENAIIRL KDGTYTTCEP NSNAWTLKGN NITLNPATGF GTATNVTLRV
     KDIPVLYTPY IYFPIDDRRQ SGFLPPTIAA GGDNGFTLVT PYYFNLAPNY DATLYPRYMA
     DRGLLMEGEF RYLTKGSEGQ FGGAYLNDEN DDRKLQSDYD KTRWMINWHH KGGLDTRWLT
     QVDYTDISDP YYFQDLETDQ IGVKRTDFLN QQGSLTYRGD SYSAVFNAQA YKLATVANVT
     PYNRLPQLTL NGTLPYNPEG LKFDYQTEAV RFDRDLRTGT FVDENGNFES RLDNNISGLD
     RANGDRLNLA PSVSLPMNWS YGFLTPKVKY VYTQYDLSLD GTGKSQLAAS GGTFDSSVNR
     SVPIFSVDSG LYFDRNTNWF GKDYRQTLEP RLFYLYVPEK DQTDIPAFDT SESTFSYSSL
     FRDNRFTGSD RIGDENKLSL GITNRWIEDN GFERQRFAIG QAIYFSDRKV QLPGVSFADR
     DDAKANVSPY ALEYEYRFNR DWRFNSDFNW DPDSKSTRSG SAMFHYQPEA EPNKIVNFGY
     RYRNDQIRYD ESTGRWIVGG GDYGRPGDPN YVKDYYKIQQ HDFSVIWPIV PQWSLISRWQ
     YDYNRERTIE AFGGFEYDNC CWKMRLVNRY WIDYDEFSQA APQNEKGDRG IFLQIVLKGL
     GGVTGAKVDS FLDKGIQGYR EREDQAF