ID   LPTD_PSYA2              Reviewed;         912 AA.
AC   Q4FRJ1;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   30-AUG-2005, sequence version 1.
DT   25-MAY-2022, entry version 101.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=Psyc_1519;
OS   Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC   Psychrobacter.
OX   NCBI_TaxID=259536;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17307 / VKM B-2377 / 273-4;
RX   PubMed=20154119; DOI=10.1128/aem.02101-09;
RA   Ayala-del-Rio H.L., Chain P.S., Grzymski J.J., Ponder M.A., Ivanova N.,
RA   Bergholz P.W., Di Bartolo G., Hauser L., Land M., Bakermans C.,
RA   Rodrigues D., Klappenbach J., Zarka D., Larimer F., Richardson P.,
RA   Murray A., Thomashow M., Tiedje J.M.;
RT   "The genome sequence of Psychrobacter arcticus 273-4, a psychroactive
RT   Siberian permafrost bacterium, reveals mechanisms for adaptation to low-
RT   temperature growth.";
RL   Appl. Environ. Microbiol. 76:2304-2312(2010).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; CP000082; AAZ19367.1; -; Genomic_DNA.
DR   RefSeq; WP_011280784.1; NC_007204.1.
DR   AlphaFoldDB; Q4FRJ1; -.
DR   SMR; Q4FRJ1; -.
DR   STRING; 259536.Psyc_1519; -.
DR   EnsemblBacteria; AAZ19367; AAZ19367; Psyc_1519.
DR   KEGG; par:Psyc_1519; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_1_0_6; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   Proteomes; UP000000546; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..27
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           28..912
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000281629"
SQ   SEQUENCE   912 AA;  101951 MW;  E0975B610C9C6302 CRC64;
     MLYSPLYQSI RLILFGALGL SSLTVSAAIN QTDSMMPEPL VTDSSNQYAD DESIQESLKR
     LAEFYERTPD TNVATSNNTG TNVSDEQSNI QNSLTPVTTN IPTVGSNLRL LPHTVDSAAR
     CEGQWVYPKK NPNYQRAVNE AGASNGQPAP NLNGLPNNQA PLFAESDYGY YDNVDYAELS
     GNVIIDQGTQ HIEAEKIVLD LSNGVAAAQG KVMFTDQATG NASATQTQDR VQKNGKTSLT
     DKAAQGGLIG VADNLNYNTE TGQSTATNVA FASVELQAHG YAKRLNRPNE SQYELDEVMY
     STCPPTNRKW QFDAKSIDLD TETGRGEAYN TTFRIADVPV FYLPYFNFPI DSRRGSGFLL
     PNASISSENG LEVDVPYYFN LAPNYDATLS THIYTTRNPM LSGEFRYLTE NYGEGIFNGS
     YLPNDKEYDG EDRRSLFYDH YWSSTSIPRL SGEAKYSHVS DADYLNDFDT LGLSDNTLNL
     ARRAQLNYYN DYVDGELKVE TFQTLDALNN NGQMLQDKDK PYSRLPQLNL DYRLPWAKNF
     DITGVSDSAY FKKSIDDGSE NEKSGTRFYN KLSASYPMEN SWGYIKPKLS LQHLFTSYDK
     DSLVDNSLDK DDGNQSVFVP QASIDAGLHF YQAGSPFGAF DDTLGGYRLL SPRLKYTYSP
     FKDQNNIPNF NTRIASINYE QLFSDSWFLG HDRLQDLHAF TPGINYRYID ATGVTRFDGS
     IAEQFYIDDG GVTLDNTKPV FTSSSSGLVW DTSTQPYNNV WVDVSGALTN SYDLNYITTE
     LRYQPSDNSL FNVGFIKRQR DENTNQLPLS ALTASAVFPI NNNWRVLAQG QYDYNRNQML
     DSLIGIDYED CCFGFAVYGR RYYNDLNIAD KPTQAIMAEV RLSGLGSGSS RLTRLLADKV
     LGFEPVQSAW KD