ID   LPTD_SHEDO              Reviewed;         766 AA.
AC   Q12K62;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   22-AUG-2006, sequence version 1.
DT   25-MAY-2022, entry version 82.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=Sden_2885;
OS   Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318161;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OS217 / ATCC BAA-1090 / DSM 15013;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
RT   "Complete sequence of Shewanella denitrificans OS217.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; CP000302; ABE56164.1; -; Genomic_DNA.
DR   RefSeq; WP_011497313.1; NC_007954.1.
DR   AlphaFoldDB; Q12K62; -.
DR   SMR; Q12K62; -.
DR   STRING; 318161.Sden_2885; -.
DR   EnsemblBacteria; ABE56164; ABE56164; Sden_2885.
DR   KEGG; sdn:Sden_2885; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_2_0_6; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   Proteomes; UP000001982; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..18
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           19..766
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_5000114822"
SQ   SEQUENCE   766 AA;  87937 MW;  3F4FBF336F368EB3 CRC64;
     MNIRYLLLLS LMPHLVWAAE EPTPEIPFSQ CLIEPPVSRS FDDRAQLTDI DPNDIVIISD
     RTDASFNKQA HFDGDVSFSQ GQRHIAADKA TLDQRQQQLS ATGNLIFKDE NITVTADTLE
     AQMSSNSATL DNTQYWLHGQ QVHGKASKMQ ITSENNLLLS NANFTTCPPG DESWLLEAEL
     IKIDSKEEWG EIWNAKLRIA DVPVLYIPYM TVPVSDKRKT GFLFPNFSTS TTNGVQVSTP
     YYWNIAPEYD LTFTPDMMSS RGLFTKTQVN YLAGEAQQGQ VNFEYLDNDN KLAGSPNRYL
     YNMSHQGAIN DNWRVQANFT DVSDNNYFND LNSDVNRSTD NQLSRIGETS YFERNWDMSV
     RVQDIKVLGE SEKPYQVMPQ LNFNYRVADI WQAIDFNFNS ELTNFEHQDD NRNTATRIHL
     VPSLVWPIQG PAGSFTSELK LLQTQFFQQT QDSNNPYNQD VSRTIPQLRL HGKVNFERPA
     NIWGEAYRQT IEPQVQYLYV GYEDQSNIGF YDTAQLQDDY FGLFRDRRFS GHDRIADANQ
     ATVGLTSRLL DASNREQFKF SIGQTLYIED SKVLLNQGLR DAQQSASVLA AELDARLYQD
     WFISGAVQHD TEHGKNKKSE VTLDYRPSND KLLQFSYRFV PDLLNTNTNG RVNISQMGVR
     TSWPLTDSLY FVGNWYHDLK EERDVETYTG IQYESCCWAV RLSYHYRIKT NYDDELMASI
     DNREEFEKGV YLNFVIKGLG GSGPLGVSDM LDEGLFNYRK PLYLRN