ID   LPTD_SHEON              Reviewed;         765 AA.
AC   Q8EB96;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 94.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=SO_3636;
OS   Shewanella oneidensis (strain MR-1).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=211586;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MR-1;
RX   PubMed=12368813; DOI=10.1038/nbt749;
RA   Heidelberg J.F., Paulsen I.T., Nelson K.E., Gaidos E.J., Nelson W.C.,
RA   Read T.D., Eisen J.A., Seshadri R., Ward N.L., Methe B.A., Clayton R.A.,
RA   Meyer T., Tsapin A., Scott J., Beanan M.J., Brinkac L.M., Daugherty S.C.,
RA   DeBoy R.T., Dodson R.J., Durkin A.S., Haft D.H., Kolonay J.F., Madupu R.,
RA   Peterson J.D., Umayam L.A., White O., Wolf A.M., Vamathevan J.J.,
RA   Weidman J.F., Impraim M., Lee K., Berry K.J., Lee C., Mueller J.,
RA   Khouri H.M., Gill J., Utterback T.R., McDonald L.A., Feldblyum T.V.,
RA   Smith H.O., Venter J.C., Nealson K.H., Fraser C.M.;
RT   "Genome sequence of the dissimilatory metal ion-reducing bacterium
RT   Shewanella oneidensis.";
RL   Nat. Biotechnol. 20:1118-1123(2002).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; AE014299; AAN56622.1; -; Genomic_DNA.
DR   RefSeq; NP_719178.1; NC_004347.2.
DR   RefSeq; WP_011073439.1; NZ_CP053946.1.
DR   AlphaFoldDB; Q8EB96; -.
DR   SMR; Q8EB96; -.
DR   STRING; 211586.SO_3636; -.
DR   PaxDb; Q8EB96; -.
DR   KEGG; son:SO_3636; -.
DR   PATRIC; fig|211586.12.peg.3525; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_2_0_6; -.
DR   OMA; DYSHLDW; -.
DR   OrthoDB; 100018at2; -.
DR   PhylomeDB; Q8EB96; -.
DR   BioCyc; SONE211586:G1GMP-3387-MON; -.
DR   Proteomes; UP000008186; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IBA:GO_Central.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..18
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           19..765
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000281633"
SQ   SEQUENCE   765 AA;  87555 MW;  91F88DADF008FA74 CRC64;
     MQIRYLLALS LLPKLVLADE SPATSASQCL IEPPVPRIVS QPGLSAADQA KIRIASDRSK
     AEMGKQAIFT GDVVFSQGDR HIAADEAILD QATEQFDANG NLVFQDSNFT VTADSLQAQM
     RSNRATLTGA QYWLHGQQVH GDAEKLQITI NNNLILTNTN FTTCPPDNVS WLLEAEKIKI
     NSEEEWGEIW NAKLRVADIP VFYIPYMTVP VSDKRKTGFL YPSFSTSTTN GFEVSAPYYW
     NIAPEYDLTF TPNYMTNRGL FTKTEFRYLA GEAQNGRLNL EYLGSDQMLN GSPNRYLYNW
     QHQGAIDKNW RVLANFTEVS DNNYFNDLKS DVNRATDNQL SRIGEVSYFE RDWDISTRVQ
     DIKVLGEDEK PYQVMPQVNF NYRAADFWNN LDFGFNSELT NFAHQDDDVN TATRLHMAPS
     LTLPIHGPSG SFTSQLKLMQ TNYWQEKNNS KFDSLDDTVS RTIPQVRING QINFERFTEL
     FEHNYRQTLE PQFQYLYVGY EDQRGIGIYD TAQLQDDYFG LFRDRRFSGL DRIADANQVT
     LGITTRLFDD HNQEATKFSL GQIFYLQDSK LGYEDNIFEQ NQSTSVLAAE LDTRLSSNWY
     LGAAIQYDTN TSDNKKTEVT LDFRPEANKL LQFSYRYVPD LLNSNTNDLV NISQAGVRGA
     WPINDSLYFV GNWYYDLNET RSIETYTGVQ YESCCYAIRL SYHYRIKTNY DDNIGSTIID
     EREQFESGVY LNLIIKGLGG SGPLGVSDML NDGLFNYRKP LYLRN