LPTD_VIBVU
ID LPTD_VIBVU Reviewed; 776 AA.
AC Q8DED5;
DT 25-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 106.
DE RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE Flags: Precursor;
GN Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN OrderedLocusNames=VV1_0660;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Together with LptE, is involved in the assembly of
CC lipopolysaccharide (LPS) at the surface of the outer membrane.
CC {ECO:0000255|HAMAP-Rule:MF_01411}.
CC -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
CC -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC Rule:MF_01411}.
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DR EMBL; AE016795; AAO09172.1; -; Genomic_DNA.
DR RefSeq; WP_011078739.1; NC_004459.3.
DR AlphaFoldDB; Q8DED5; -.
DR SMR; Q8DED5; -.
DR EnsemblBacteria; AAO09172; AAO09172; VV1_0660.
DR KEGG; vvu:VV1_0660; -.
DR HOGENOM; CLU_009039_2_0_6; -.
DR OMA; YDRMPQI; -.
DR Proteomes; UP000002275; Chromosome 1.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR InterPro; IPR020889; LipoPS_assembly_LptD.
DR InterPro; IPR007543; LptD_C.
DR InterPro; IPR005653; OstA-like_N.
DR Pfam; PF04453; LptD; 1.
DR Pfam; PF03968; LptD_N; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Membrane; Signal.
FT SIGNAL 1..24
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT CHAIN 25..776
FT /note="LPS-assembly protein LptD"
FT /id="PRO_0000020294"
SQ SEQUENCE 776 AA; 88840 MW; 39602F624548C9EF CRC64;
MQHFSRTFLA ASIATALFAP YAQAEAILNN SVQEMPTTDQ CLVDAEKNDA NAEIVIQADN
LQAINGDKAI YSGDVEVTQG NKKITAESVT LHQQENIVVA EGNVTFNDGE VKASSSKVTN
NMTSETFSLE NTEYQFLCQQ GRGQAAYIAK TGQAVYELED GSITSCPADD NAWRLVASSI
EVDQNEETAT FYHPRFEVLD VPVFYAPYLT LPIGNTRKTG FLFPSVNYGS SDGLEIEVPF
YWNIAPNYDL TLTTLYMQQR GVKQDADFRY LSDGWGAGEL KGEYLPGDEK YNDEDRWGYQ
YKHDGIINKQ WLVSLDYSQV SDIDYFRDLS SDLGNREDGQ LMQQGKVAYR SDFWDMSLQV
RDFQILLQDN NQPYRLLPQV KFNFYTPLLG NYLNFDVKSE LTQFDIQDAS KPNALRAHVE
PGLTIPLSTS WATWTTEARL LATYYQQDLD RLTDPTLKSQ LDETVARVIP EYRSHARIYL
EREAKLFEGY TQSLEPQIQY LYVPEEEQGN IYNYDTTLLQ TDYYGLFRSR KYSSIDKIAA
ANQLSYGAST RFFDDEYKER LNISFGQIYY IDKKTKLTGN QEETSNYSSW AVETDFNYED
FLFYHGGIQY DIDLNAMQLA NSTLEYQFTD GFIQGNYRYV TKDYIEDTIS FDELDKITRK
GISQAGIVGA YNINRHWSAS GQYYYDLTEE IDLEWMASLR YQSDCWYIGF TYTNQLVKWR
NDVVGGDSNN PVYDTNISVN FGIQGFATKN KAETAAKELD STDNAITYGR PFYLNN