ID   LPTD_XANOM              Reviewed;         813 AA.
AC   Q2NZI7;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   07-FEB-2006, sequence version 1.
DT   25-MAY-2022, entry version 88.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=XOO3535;
OS   Xanthomonas oryzae pv. oryzae (strain MAFF 311018).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas.
OX   NCBI_TaxID=342109;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MAFF 311018;
RA   Ochiai H., Inoue Y., Takeya M., Sasaki A., Kaku H.;
RT   "Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of
RT   large numbers of effector genes and insertion sequences to its race
RT   diversity.";
RL   Jpn. Agric. Res. Q. 39:275-287(2005).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; AP008229; BAE70290.1; -; Genomic_DNA.
DR   RefSeq; WP_011409337.1; NC_007705.1.
DR   AlphaFoldDB; Q2NZI7; -.
DR   SMR; Q2NZI7; -.
DR   PRIDE; Q2NZI7; -.
DR   KEGG; xom:XOO3535; -.
DR   HOGENOM; CLU_009039_0_0_6; -.
DR   OMA; DYSHLDW; -.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR045659; LptD_2.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF19838; LptD_2; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           23..813
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000281641"
SQ   SEQUENCE   813 AA;  92508 MW;  BC8772C85977CA33 CRC64;
     MRRALRLLPL PLSIAICLPA MAADKPFNWG LCPTVDPLPG FDGAPAADPK AAEMRQQLPT
     DIEGDQLSGT STTPQYQGNV ALKRGDQFLG ADNLRMDTET GNYIAEGNVR YQDTSFRMVA
     DRAEGNQDTD THKVTNIRYQ LVERRGNGDA ESVDLQGQVG QMHRSTYTTC DPSQPIWRVR
     APEIDVDNGE GFGTARNAVL QIGNVPVLYF PWFKFPIDDR RQTGLLFPQF GLSRRNGFDY
     LQPIYLNLAP NYDATLLPRY MSKRGFMFGT EFRYLYEGGR GEVTGNYLPN DKLRDKDRGS
     VFYSGYHNVN SNWQARSSIS WVSDTRYVED FTSRLNGMGS TSSLQSTVGI YGTGETWTAG
     LMAERWQLTD YTLDERSLPY NRQPRAYFNW EKPFGIFEAG VYAEAVRFTH DDSYFVQPPS
     PSVPGEANNR DNNDKYVRTN IRNQEYGSGS RLDLKPYVSM PLSGAAWFFT PTLAWRYTAY
     QLDSTLAKTG PLTGDRSPSR SLPIASVDAG LYFDRETSLL GTNYLNTLEP RMYYLYVPYR
     DQDDLPVFDT RPFTFSYGQL FRDTRYTGAD RQNDANQLTL AVTSRWLRQD DGREKLSLSA
     GQILYFSDSR VTINNSTNAV AGSEQTIDQG KSAWVVDANY MINDRWSMGA TYQWNPNSRK
     EDLASLRTRY LLDNDGIINL AYRYRRNLID NSDQLKQADF SFLYPINPSW SAVGRYYYSL
     QDRKPLEIIG GVQWDSCCLA VRGLVRRFVR NRDGQMDNSI QIEFVLKGLS SFGQNTDRTL
     RRAILGYYRD DLYLVPPSNT TTNPDDYDPN LIP