ID   LPTD_XYLFA              Reviewed;         792 AA.
AC   Q9PF41;
DT   08-NOV-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   25-MAY-2022, entry version 97.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=XF_0837;
OS   Xylella fastidiosa (strain 9a5c).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xylella.
OX   NCBI_TaxID=160492;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=9a5c;
RX   PubMed=10910347; DOI=10.1038/35018003;
RA   Simpson A.J.G., Reinach F.C., Arruda P., Abreu F.A., Acencio M.,
RA   Alvarenga R., Alves L.M.C., Araya J.E., Baia G.S., Baptista C.S.,
RA   Barros M.H., Bonaccorsi E.D., Bordin S., Bove J.M., Briones M.R.S.,
RA   Bueno M.R.P., Camargo A.A., Camargo L.E.A., Carraro D.M., Carrer H.,
RA   Colauto N.B., Colombo C., Costa F.F., Costa M.C.R., Costa-Neto C.M.,
RA   Coutinho L.L., Cristofani M., Dias-Neto E., Docena C., El-Dorry H.,
RA   Facincani A.P., Ferreira A.J.S., Ferreira V.C.A., Ferro J.A., Fraga J.S.,
RA   Franca S.C., Franco M.C., Frohme M., Furlan L.R., Garnier M., Goldman G.H.,
RA   Goldman M.H.S., Gomes S.L., Gruber A., Ho P.L., Hoheisel J.D.,
RA   Junqueira M.L., Kemper E.L., Kitajima J.P., Krieger J.E., Kuramae E.E.,
RA   Laigret F., Lambais M.R., Leite L.C.C., Lemos E.G.M., Lemos M.V.F.,
RA   Lopes S.A., Lopes C.R., Machado J.A., Machado M.A., Madeira A.M.B.N.,
RA   Madeira H.M.F., Marino C.L., Marques M.V., Martins E.A.L., Martins E.M.F.,
RA   Matsukuma A.Y., Menck C.F.M., Miracca E.C., Miyaki C.Y.,
RA   Monteiro-Vitorello C.B., Moon D.H., Nagai M.A., Nascimento A.L.T.O.,
RA   Netto L.E.S., Nhani A. Jr., Nobrega F.G., Nunes L.R., Oliveira M.A.,
RA   de Oliveira M.C., de Oliveira R.C., Palmieri D.A., Paris A., Peixoto B.R.,
RA   Pereira G.A.G., Pereira H.A. Jr., Pesquero J.B., Quaggio R.B.,
RA   Roberto P.G., Rodrigues V., de Rosa A.J.M., de Rosa V.E. Jr., de Sa R.G.,
RA   Santelli R.V., Sawasaki H.E., da Silva A.C.R., da Silva A.M.,
RA   da Silva F.R., Silva W.A. Jr., da Silveira J.F., Silvestri M.L.Z.,
RA   Siqueira W.J., de Souza A.A., de Souza A.P., Terenzi M.F., Truffi D.,
RA   Tsai S.M., Tsuhako M.H., Vallada H., Van Sluys M.A., Verjovski-Almeida S.,
RA   Vettore A.L., Zago M.A., Zatz M., Meidanis J., Setubal J.C.;
RT   "The genome sequence of the plant pathogen Xylella fastidiosa.";
RL   Nature 406:151-159(2000).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; AE003849; AAF83647.1; -; Genomic_DNA.
DR   PIR; B82756; B82756.
DR   RefSeq; WP_010893357.1; NC_002488.3.
DR   AlphaFoldDB; Q9PF41; -.
DR   SMR; Q9PF41; -.
DR   STRING; 160492.XF_0837; -.
DR   EnsemblBacteria; AAF83647; AAF83647; XF_0837.
DR   KEGG; xfa:XF_0837; -.
DR   eggNOG; COG1452; Bacteria.
DR   HOGENOM; CLU_009039_0_0_6; -.
DR   OMA; DYSHLDW; -.
DR   Proteomes; UP000000812; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   Pfam; PF04453; LptD; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Reference proteome; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           23..792
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000020299"
SQ   SEQUENCE   792 AA;  91002 MW;  EB97FF8CFD35A422 CRC64;
     MYRVLRLLPL PLSVAISLSA LADEKPPNWG LCPATLPLQG FEQAPGMDKH VVQSRPQLPT
     NIEGDTLTGT ARTPLYQGNV LMARGDQFLG ADSVRMDTET DSYVAEGHVR YQDSSILVVA
     DRAEGNQDTD VHKISNIQYQ LIGRRGNGVA KSVDIHGQVG QTHEATYTTC DPSQAIWRLR
     APEIDVDNVE GFGVARHAVF EVGQWPVLYL PWFKFPIDSR RQTGLLYPQL GYSGRNGFDY
     AQPIYLNLAP NYDATLYPRY MQKRGFMIDT EFRYLYDDGK WQTRAAFIPN DQLRDKDRGR
     FSFNGYHNID NHWQARASLA WVSDTRYMED FSSRLVGMSS LSSLQSTVGV YGTGETWTAG
     LMADRWQLTD YSLDESALAY NRQPRLFFNW DKPVFDFLEF GLYSEVVRFK HDDAYLVALQ
     NDGNYLRTGE VIRYYGGTRL DVKPYLLLPF TGASWYVTPT FGWRYSSYYL DSGIAEQLNG
     NRTPVRSLPI ISLDSGVYLD RDTSVFGRNY LNTLEPRFYY LYVPYRNQSD LPLFDTRAFT
     FSWGQLFRDS RYTGPDRQND ANQLTLAVTS RWLDQNTGKE DLALSVGQIL YFKDSLVTLN
     DSEERIQQGK SVWVSDVAYN VNDRWTLNAT YQWNPNFRRD DLASIRARYL IGSDGIINLA
     YRYRRNTLDG TTQLKQTDFS FLYPINPRWS AIGRYYYSLL DKKPLEIISG LQWDSCCLAV
     RTVLRRYMRD RTGNMDNSIQ LEFVFKGLSS VGQDTDRVLR RAILGYYRDD LYLVPPSNTT
     TDPDAYDPNK IP