ID   LPTD_XYLFT              Reviewed;         792 AA.
AC   Q87AI9;
DT   16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT   16-JUN-2003, sequence version 1.
DT   25-MAY-2022, entry version 97.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000255|HAMAP-Rule:MF_01411}; Synonyms=imp, ostA;
GN   OrderedLocusNames=PD_1836;
OS   Xylella fastidiosa (strain Temecula1 / ATCC 700964).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xylella.
OX   NCBI_TaxID=183190;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Temecula1 / ATCC 700964;
RX   PubMed=12533478; DOI=10.1128/jb.185.3.1018-1026.2003;
RA   Van Sluys M.A., de Oliveira M.C., Monteiro-Vitorello C.B., Miyaki C.Y.,
RA   Furlan L.R., Camargo L.E.A., da Silva A.C.R., Moon D.H., Takita M.A.,
RA   Lemos E.G.M., Machado M.A., Ferro M.I.T., da Silva F.R., Goldman M.H.S.,
RA   Goldman G.H., Lemos M.V.F., El-Dorry H., Tsai S.M., Carrer H.,
RA   Carraro D.M., de Oliveira R.C., Nunes L.R., Siqueira W.J., Coutinho L.L.,
RA   Kimura E.T., Ferro E.S., Harakava R., Kuramae E.E., Marino C.L.,
RA   Giglioti E., Abreu I.L., Alves L.M.C., do Amaral A.M., Baia G.S.,
RA   Blanco S.R., Brito M.S., Cannavan F.S., Celestino A.V., da Cunha A.F.,
RA   Fenille R.C., Ferro J.A., Formighieri E.F., Kishi L.T., Leoni S.G.,
RA   Oliveira A.R., Rosa V.E. Jr., Sassaki F.T., Sena J.A.D., de Souza A.A.,
RA   Truffi D., Tsukumo F., Yanai G.M., Zaros L.G., Civerolo E.L.,
RA   Simpson A.J.G., Almeida N.F. Jr., Setubal J.C., Kitajima J.P.;
RT   "Comparative analyses of the complete genome sequences of Pierce's disease
RT   and citrus variegated chlorosis strains of Xylella fastidiosa.";
RL   J. Bacteriol. 185:1018-1026(2003).
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000255|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000255|HAMAP-
CC       Rule:MF_01411}.
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DR   EMBL; AE009442; AAO29668.1; -; Genomic_DNA.
DR   RefSeq; WP_011098274.1; NC_004556.1.
DR   AlphaFoldDB; Q87AI9; -.
DR   SMR; Q87AI9; -.
DR   PRIDE; Q87AI9; -.
DR   EnsemblBacteria; AAO29668; AAO29668; PD_1836.
DR   GeneID; 58017356; -.
DR   KEGG; xft:PD_1836; -.
DR   HOGENOM; CLU_009039_0_0_6; -.
DR   OMA; DYSHLDW; -.
DR   Proteomes; UP000002516; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   Pfam; PF04453; LptD; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane; Membrane; Signal.
FT   SIGNAL          1..22
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01411"
FT   CHAIN           23..792
FT                   /note="LPS-assembly protein LptD"
FT                   /id="PRO_0000020300"
SQ   SEQUENCE   792 AA;  90769 MW;  70637D6FA7B62DAD CRC64;
     MYRVLRLLPL PLSVAISLSA LADEKPPNWG LCPATLPLQG FEQAPGMDKH VVQSRPQLPT
     NIEGDTLTGT ARTPLYQGNV LMARGDQLLG ADSVRMDTET DSYVAEGHVR YQDSSILVVA
     DRAEGNQDTD VHKISNIQYQ LIGRRGNGVA KSVDIHGQVG QTHEATYTTC DPSQAIWRLR
     APEIDVDNVE GFGVARHAVF EVGQWPVLYL PWFKFPIDSR RQTGLLYPQL GYSGRNGFDY
     AQPIYLNLAP NYDATLYPRY MQKRGFMIDT EFRYLYDDGK WQTRAAFIPN DQLRDKDRGR
     FSFNGYHNID NHWQARASLA WVSDTRYMED FSSRLVGMSS LSSLQSTVGV YGTGETWTAG
     LMADRWQLTD YSLNESALAY NRQPRLFFNW DKPVLDFLEF GLYSEVVRFK HDDAYLVALQ
     NDGNYLRTGE VIRYYGGTRL DVKPYVSLPF TGASWYVTPT FGWRYSSYYL DSGIAEQLNG
     SRTPVRSLPI VSLDSGVYLD RDTTVFGRNY LNTLEPRFYY LYVPYRNQSD LPLFDTRAFT
     FSWGQLFRDS RYTGPDRQND ANQLTLAVTS RWLDQNTGKE DLALSVGQIL YFKDSLVTLS
     DSEERIQKGK SVWVSDVAYN VNDRWTLNAT YQWNPNFRRD DLASVRARYL IGSDGIINLA
     YRYRRNTLDG TTQLKQTDFS FLYPINPRWS AIGRYYYSLL DKKPLEIIGG LQWDSCCLAV
     RTVLRRHMRD RTGNMDNSIQ LEFVFKGLSS VGQDTDRVLR RAILGYYRDD LYLVPPSNTT
     TDPDAYDPNK IP