LPXD_SYNSC
ID LPXD_SYNSC Reviewed; 347 AA.
AC Q3AIH3;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 2.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00523};
DE EC=2.3.1.191 {ECO:0000255|HAMAP-Rule:MF_00523};
GN Name=lpxD {ECO:0000255|HAMAP-Rule:MF_00523};
GN OrderedLocusNames=Syncc9605_1866;
OS Synechococcus sp. (strain CC9605).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus;
OC unclassified Synechococcus.
OX NCBI_TaxID=110662;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC9605;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Schmutz J., Martinez M., Larimer F.,
RA Land M., Kyrpides N., Ivanova N., Richardson P.;
RT "Complete sequence of Synechococcus sp. CC9605.";
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-
CC hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of
CC lipid A, a phosphorylated glycolipid that anchors the
CC lipopolysaccharide to the outer membrane of the cell.
CC {ECO:0000255|HAMAP-Rule:MF_00523}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a (3R)-hydroxyacyl-[ACP] + a UDP-3-O-[(3R)-3-hydroxyacyl]-
CC alpha-D-glucosamine = a UDP-2-N,3-O-bis[(3R)-3-hydroxyacyl]-alpha-D-
CC glucosamine + H(+) + holo-[ACP]; Xref=Rhea:RHEA:53836, Rhea:RHEA-
CC COMP:9685, Rhea:RHEA-COMP:9945, ChEBI:CHEBI:15378, ChEBI:CHEBI:64479,
CC ChEBI:CHEBI:78827, ChEBI:CHEBI:137740, ChEBI:CHEBI:137748;
CC EC=2.3.1.191; Evidence={ECO:0000255|HAMAP-Rule:MF_00523};
CC -!- PATHWAY: Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.
CC {ECO:0000255|HAMAP-Rule:MF_00523}.
CC -!- SUBUNIT: Homotrimer. {ECO:0000255|HAMAP-Rule:MF_00523}.
CC -!- SIMILARITY: Belongs to the transferase hexapeptide repeat family. LpxD
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_00523}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABB35609.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; CP000110; ABB35609.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_041435733.1; NC_007516.1.
DR AlphaFoldDB; Q3AIH3; -.
DR SMR; Q3AIH3; -.
DR STRING; 110662.Syncc9605_1866; -.
DR EnsemblBacteria; ABB35609; ABB35609; Syncc9605_1866.
DR KEGG; syd:Syncc9605_1866; -.
DR eggNOG; COG1044; Bacteria.
DR HOGENOM; CLU_049865_0_2_3; -.
DR OrthoDB; 1602061at2; -.
DR UniPathway; UPA00973; -.
DR GO; GO:0031470; C:carboxysome; IEA:UniProt.
DR GO; GO:0016410; F:N-acyltransferase activity; IEA:InterPro.
DR GO; GO:0043886; F:structural constituent of carboxysome; IEA:UniProt.
DR GO; GO:0009245; P:lipid A biosynthetic process; IEA:UniProtKB-UniRule.
DR CDD; cd03352; LbH_LpxD; 1.
DR HAMAP; MF_00523; LpxD; 1.
DR InterPro; IPR001451; Hexapep.
DR InterPro; IPR007691; LpxD.
DR InterPro; IPR011004; Trimer_LpxA-like_sf.
DR InterPro; IPR020573; UDP_GlcNAc_AcTrfase_non-rep.
DR PANTHER; PTHR43378; PTHR43378; 1.
DR Pfam; PF00132; Hexapep; 2.
DR Pfam; PF04613; LpxD; 1.
DR SUPFAM; SSF51161; SSF51161; 1.
DR TIGRFAMs; TIGR01853; lipid_A_lpxD; 1.
PE 3: Inferred from homology;
KW Acyltransferase; Lipid A biosynthesis; Lipid biosynthesis;
KW Lipid metabolism; Repeat; Transferase.
FT CHAIN 1..347
FT /note="UDP-3-O-acylglucosamine N-acyltransferase"
FT /id="PRO_0000264443"
FT ACT_SITE 248
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00523"
SQ SEQUENCE 347 AA; 35840 MW; 72B77C736C62214A CRC64;
MRFSTLIKVL QTGDAGLRWS QAGLDPWLEG AASLDQASAA QLSFLEKGNA LTAALGASGV
GALLLPDQQD LIDLASQRGI AFAVFADPRL AFAEALDQLY PRRRPLAEIH PSAVIDERAV
VGPGTAVGPR VCIGEGSRLG ADCIVHPGVV IYDDVVVGDG CELHANAVLH PGSRLGRGCV
VNSNAVVGSE GFGFVPTAKG WRKMPQTGQV VLEDGVEVGC GTTIDRPSVG ETRIGAGTKI
DNLVQIGHGV TTGRGCAFAS QVGIAGGARI GHGVILAGQV GVANRAVVGD RAIASSKSGI
HGDVAPGEVV SGFPAIPNRL WLRCANTFSK LPEMAKTLRE LKRDTPQ