LPXZ_BACTN
ID LPXZ_BACTN Reviewed; 461 AA.
AC Q8A015;
DT 24-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Bifunctional enzyme LpxC/FabZ;
DE Includes:
DE RecName: Full=UDP-3-O-acyl-N-acetylglucosamine deacetylase;
DE Short=UDP-3-O-acyl-GlcNAc deacetylase;
DE EC=3.5.1.108;
DE AltName: Full=UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase;
DE Includes:
DE RecName: Full=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;
DE EC=4.2.1.59;
DE AltName: Full=(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase;
DE Short=(3R)-hydroxymyristoyl-ACP dehydrase;
DE AltName: Full=Beta-hydroxyacyl-ACP dehydratase;
GN Name=lpxC/fabZ; OrderedLocusNames=BT_4206;
OS Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 /
OS CCUG 10774 / NCTC 10582 / VPI-5482 / E50).
OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=226186;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 /
RC VPI-5482 / E50;
RX PubMed=12663928; DOI=10.1126/science.1080029;
RA Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C.,
RA Hooper L.V., Gordon J.I.;
RT "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.";
RL Science 299:2074-2076(2003).
CC -!- FUNCTION: Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-
CC acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the
CC committed step in lipid A biosynthesis.
CC -!- FUNCTION: Involved in unsaturated fatty acids biosynthesis. Catalyzes
CC the dehydration of short chain beta-hydroxyacyl-ACPs and long chain
CC saturated and unsaturated beta-hydroxyacyl-ACPs. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a UDP-3-O-[(3R)-3-hydroxyacyl]-N-acetyl-alpha-D-glucosamine +
CC H2O = a UDP-3-O-[(3R)-3-hydroxyacyl]-alpha-D-glucosamine + acetate;
CC Xref=Rhea:RHEA:67816, ChEBI:CHEBI:15377, ChEBI:CHEBI:30089,
CC ChEBI:CHEBI:137740, ChEBI:CHEBI:173225; EC=3.5.1.108;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O;
CC Xref=Rhea:RHEA:13097, Rhea:RHEA-COMP:9925, Rhea:RHEA-COMP:9945,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:78784, ChEBI:CHEBI:78827; EC=4.2.1.59;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC -!- PATHWAY: Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A)
CC from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-
CC acetyl-alpha-D-glucosamine: step 2/6.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the LpxC family.
CC {ECO:0000305}.
CC -!- SIMILARITY: In the C-terminal section; belongs to the thioester
CC dehydratase family. {ECO:0000305}.
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DR EMBL; AE015928; AAO79311.1; -; Genomic_DNA.
DR RefSeq; NP_813117.1; NC_004663.1.
DR RefSeq; WP_008759880.1; NZ_UYXG01000012.1.
DR AlphaFoldDB; Q8A015; -.
DR SMR; Q8A015; -.
DR STRING; 226186.BT_4206; -.
DR PaxDb; Q8A015; -.
DR PRIDE; Q8A015; -.
DR EnsemblBacteria; AAO79311; AAO79311; BT_4206.
DR GeneID; 60925379; -.
DR KEGG; bth:BT_4206; -.
DR PATRIC; fig|226186.12.peg.4273; -.
DR eggNOG; COG0764; Bacteria.
DR eggNOG; COG0774; Bacteria.
DR HOGENOM; CLU_046528_2_0_10; -.
DR InParanoid; Q8A015; -.
DR OMA; RRGICHM; -.
DR UniPathway; UPA00359; UER00478.
DR Proteomes; UP000001414; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008659; F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0008693; F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0047451; F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0004317; F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008759; F:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0103117; F:UDP-3-O-acyl-N-acetylglucosamine deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-UniRule.
DR GO; GO:0009245; P:lipid A biosynthetic process; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1700.10; -; 1.
DR Gene3D; 3.30.230.20; -; 1.
DR HAMAP; MF_00406; FabZ; 1.
DR HAMAP; MF_00388; LpxC; 1.
DR InterPro; IPR013114; FabA_FabZ.
DR InterPro; IPR010084; FabZ.
DR InterPro; IPR029069; HotDog_dom_sf.
DR InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR InterPro; IPR004463; UDP-acyl_GlcNac_deAcase.
DR InterPro; IPR011334; UDP-acyl_GlcNac_deAcase_C.
DR InterPro; IPR015870; UDP-acyl_N-AcGlcN_deAcase_N.
DR PANTHER; PTHR30272; PTHR30272; 1.
DR Pfam; PF07977; FabA; 1.
DR Pfam; PF03331; LpxC; 1.
DR SUPFAM; SSF54211; SSF54211; 2.
DR SUPFAM; SSF54637; SSF54637; 1.
DR TIGRFAMs; TIGR01750; fabZ; 1.
DR TIGRFAMs; TIGR00325; lpxC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Lipid A biosynthesis; Lipid biosynthesis;
KW Lipid metabolism; Lyase; Metal-binding; Multifunctional enzyme;
KW Reference proteome; Zinc.
FT CHAIN 1..461
FT /note="Bifunctional enzyme LpxC/FabZ"
FT /id="PRO_0000191975"
FT REGION 1..302
FT /note="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
FT REGION 303..461
FT /note="3-hydroxyacyl-[acyl-carrier-protein] dehydratase"
FT ACT_SITE 287
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT ACT_SITE 364
FT /evidence="ECO:0000250"
FT BINDING 78
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 260
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 264
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
SQ SEQUENCE 461 AA; 51600 MW; 633203F800223366 CRC64;
MLKQKTLKDS FSLSGKGLHT GLDLTVTFNP APDNHGYKIQ RIDLEGQPTI DAVADNVTET
TRGTVLSKNG VKVSTVEHGM AALYALGIDN CLIQVNGPEF PILDGSAQYY VQEIERVGTE
EQSAVKDFYI IKSKIEFRDE STGSSIIVLP DENFSLNVLV SYDSTIIPNQ FATLEDMHNF
KDEVAASRTF VFVREIEPLL SAGLIKGGDL DNAIVIYERK MSQESYDKLA DVMGVPHMDA
DQLGYINHKP LVWPNECARH KLLDVIGDLA LIGKPIKGRI IATRPGHTIN NKFARQMRKE
IRLHEIQAPT YDCNREPVMD VNRIRELLPH RYPFQLVDKV IEMGASYIVG IKNITANEPF
FQGHFPQEPV MPGVLQIEAM AQVGGLLVLN SVDEPERYST YFMKIDGVKF RQKVVPGDTL
LFRVELLAPI RRGISTMKGY AFVGEKVVCE AEFMAQIVKN K