LR74A_RAT
ID LR74A_RAT Reviewed; 479 AA.
AC A0JPI9; Q4KLZ5;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Leucine-rich repeat-containing protein 74A {ECO:0000250|UniProtKB:Q0VAA2};
DE AltName: Full=Leucine-rich repeat-containing protein 74 {ECO:0000312|RGD:1564488};
GN Name=Lrrc74a {ECO:0000250|UniProtKB:Q0VAA2};
GN Synonyms=Lrrc74 {ECO:0000312|RGD:1564488};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=A0JPI9-1; Sequence=Displayed;
CC Name=2;
CC IsoId=A0JPI9-2; Sequence=VSP_028431, VSP_028432;
CC -!- MISCELLANEOUS: [Isoform 2]: May be produced at very low levels due to a
CC premature stop codon in the mRNA, leading to nonsense-mediated mRNA
CC decay. {ECO:0000305}.
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DR EMBL; BC098927; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; BC127444; AAI27445.1; -; mRNA.
DR RefSeq; NP_001032872.2; NM_001037783.2. [A0JPI9-1]
DR AlphaFoldDB; A0JPI9; -.
DR SMR; A0JPI9; -.
DR PhosphoSitePlus; A0JPI9; -.
DR PRIDE; A0JPI9; -.
DR Ensembl; ENSRNOT00000098897; ENSRNOP00000086029; ENSRNOG00000052456. [A0JPI9-1]
DR GeneID; 314328; -.
DR KEGG; rno:314328; -.
DR UCSC; RGD:1564488; rat. [A0JPI9-1]
DR CTD; 145497; -.
DR RGD; 1564488; Lrrc74a.
DR GeneTree; ENSGT00940000154297; -.
DR InParanoid; A0JPI9; -.
DR OrthoDB; 1463268at2759; -.
DR PhylomeDB; A0JPI9; -.
DR PRO; PR:A0JPI9; -.
DR Proteomes; UP000002494; Chromosome 6.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF13516; LRR_6; 6.
PE 2: Evidence at transcript level;
KW Alternative splicing; Leucine-rich repeat; Reference proteome; Repeat.
FT CHAIN 1..479
FT /note="Leucine-rich repeat-containing protein 74A"
FT /id="PRO_0000306174"
FT REPEAT 119..140
FT /note="LRR 1"
FT REPEAT 147..167
FT /note="LRR 2"
FT REPEAT 176..197
FT /note="LRR 3"
FT REPEAT 204..225
FT /note="LRR 4"
FT REPEAT 232..253
FT /note="LRR 5"
FT REPEAT 260..281
FT /note="LRR 6"
FT REPEAT 288..309
FT /note="LRR 7"
FT REPEAT 316..336
FT /note="LRR 8"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 257..262
FT /note="TNVTLK -> LPSPGD (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:15489334"
FT /id="VSP_028431"
FT VAR_SEQ 263..479
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:15489334"
FT /id="VSP_028432"
SQ SEQUENCE 479 AA; 53227 MW; 257E8BC701CEA73E CRC64;
MDDDDIEPLE YETKDETEAA LAPQSSEDTL YCEAEAAPSV EKEKPTREDS ETDLEIEDTE
KFFSIGQKEL YLEACKLVGV VPVSYFIRNM EESCMNLNHH GLGPMGIKAI AITLVSNTTV
LKLELEDNSI QEEGILSLME MLHENYYLQE LNVSDNNLGL EGARIISDFL QENNSSLWKL
KLSGNKFKEE CALLLCQALS SNYRIRSLNL SHNEFSDTAG EYLGQMLALN VGLQSLNLSW
NHFNVRGAVA LCNGLRTNVT LKKLDVSMNG FGNDGALALG DTLKLNSCLV YVDVSRNGIT
NEGASRISKG LENNECLQVL KLFLNPVSLE GAYSLILAIK RNPKSRMEDL DISNVLVSEQ
FVKVLDGVCA IHPQLDVVYK GLQGLSTKKT VSLETNPIKL IQNYTDQNKI SVVEFFKSLN
PSGLMTMPVG DFRKAIIQQT NIPINRYQAR ELIKKLEEKN GMVNFSGFKS LKVTAAGQL