LRC3B_DANRE
ID LRC3B_DANRE Reviewed; 258 AA.
AC A3KNN3;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 03-APR-2007, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Leucine-rich repeat-containing protein 3B;
DE Flags: Precursor;
GN Name=lrrc3b; ORFNames=zgc:162270;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the LRRC3 family. {ECO:0000305}.
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DR EMBL; BC133927; AAI33928.1; -; mRNA.
DR RefSeq; NP_001082985.1; NM_001089516.1.
DR RefSeq; XP_005173781.1; XM_005173724.3.
DR AlphaFoldDB; A3KNN3; -.
DR SMR; A3KNN3; -.
DR STRING; 7955.ENSDARP00000086615; -.
DR PaxDb; A3KNN3; -.
DR ABCD; A3KNN3; 2 sequenced antibodies.
DR Ensembl; ENSDART00000092183; ENSDARP00000086615; ENSDARG00000063215.
DR GeneID; 100037364; -.
DR KEGG; dre:100037364; -.
DR CTD; 116135; -.
DR ZFIN; ZDB-GENE-070410-55; lrrc3b.
DR eggNOG; KOG4237; Eukaryota.
DR GeneTree; ENSGT00940000157780; -.
DR HOGENOM; CLU_064640_0_0_1; -.
DR InParanoid; A3KNN3; -.
DR OMA; ISGMAHN; -.
DR OrthoDB; 1050061at2759; -.
DR PhylomeDB; A3KNN3; -.
DR TreeFam; TF327070; -.
DR PRO; PR:A3KNN3; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 19.
DR Bgee; ENSDARG00000063215; Expressed in olfactory system and 12 other tissues.
DR GO; GO:0031012; C:extracellular matrix; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13855; LRR_8; 1.
DR SMART; SM00369; LRR_TYP; 3.
DR SMART; SM00013; LRRNT; 1.
DR PROSITE; PS51450; LRR; 2.
PE 2: Evidence at transcript level;
KW Glycoprotein; Leucine-rich repeat; Membrane; Reference proteome; Repeat;
KW Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..33
FT /evidence="ECO:0000255"
FT CHAIN 34..258
FT /note="Leucine-rich repeat-containing protein 3B"
FT /id="PRO_0000345966"
FT TRANSMEM 204..224
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 34..68
FT /note="LRRNT"
FT REPEAT 69..90
FT /note="LRR 1"
FT REPEAT 93..114
FT /note="LRR 2"
FT REPEAT 118..139
FT /note="LRR 3"
FT DOMAIN 149..196
FT /note="LRRCT"
FT CARBOHYD 51
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 98
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 258 AA; 29100 MW; 673251C44366116E CRC64;
MTPLDLWLSR SIPMCLLLQS LVLMVLCFPS ASTCPKGCTC QRSESPPHGL NVTCSLSRLK
EIPPDVPPDT QLLQLDRNHI SLVPDRIFHG LRMLRRLNLS HNAVETLGEG AFIGLEGSLE
VLDLSYNRIT SVHKDAFARL KARVVVDNNP WHCDCALQQA LGGMAHNHER VLCRSSELRD
QEGQPFMAVD ADLCNLAKRT TDYAMLVTMF GWFAMVISYV VYYVRQNQED ARRHLEYLKS
LPSKPKKPDE PEDISTVV