LRC3B_MOUSE
ID LRC3B_MOUSE Reviewed; 259 AA.
AC Q8VCH9;
DT 19-OCT-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 144.
DE RecName: Full=Leucine-rich repeat-containing protein 3B;
DE AltName: Full=Leucine-rich repeat protein 15;
DE Flags: Precursor;
GN Name=Lrrc3b; Synonyms=Lrp15;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Retina;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the LRRC3 family. {ECO:0000305}.
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DR EMBL; BC019794; AAH19794.1; -; mRNA.
DR CCDS; CCDS26829.1; -.
DR RefSeq; NP_666164.1; NM_146052.4.
DR RefSeq; XP_006518068.1; XM_006518005.2.
DR RefSeq; XP_006518069.1; XM_006518006.1.
DR AlphaFoldDB; Q8VCH9; -.
DR SMR; Q8VCH9; -.
DR STRING; 10090.ENSMUSP00000059463; -.
DR GlyGen; Q8VCH9; 2 sites.
DR iPTMnet; Q8VCH9; -.
DR PhosphoSitePlus; Q8VCH9; -.
DR PaxDb; Q8VCH9; -.
DR PRIDE; Q8VCH9; -.
DR ProteomicsDB; 287268; -.
DR Antibodypedia; 2670; 108 antibodies from 21 providers.
DR Ensembl; ENSMUST00000055211; ENSMUSP00000059463; ENSMUSG00000045201.
DR Ensembl; ENSMUST00000163937; ENSMUSP00000128624; ENSMUSG00000045201.
DR Ensembl; ENSMUST00000223700; ENSMUSP00000153616; ENSMUSG00000045201.
DR GeneID; 218763; -.
DR KEGG; mmu:218763; -.
DR UCSC; uc007sgt.3; mouse.
DR CTD; 116135; -.
DR MGI; MGI:2384996; Lrrc3b.
DR VEuPathDB; HostDB:ENSMUSG00000045201; -.
DR eggNOG; KOG4237; Eukaryota.
DR GeneTree; ENSGT00940000157780; -.
DR HOGENOM; CLU_064640_0_0_1; -.
DR InParanoid; Q8VCH9; -.
DR OMA; ISGMAHN; -.
DR OrthoDB; 1050061at2759; -.
DR PhylomeDB; Q8VCH9; -.
DR TreeFam; TF327070; -.
DR BioGRID-ORCS; 218763; 1 hit in 72 CRISPR screens.
DR ChiTaRS; Lrrc3b; mouse.
DR PRO; PR:Q8VCH9; -.
DR Proteomes; UP000000589; Chromosome 14.
DR RNAct; Q8VCH9; protein.
DR Bgee; ENSMUSG00000045201; Expressed in habenula and 153 other tissues.
DR ExpressionAtlas; Q8VCH9; baseline and differential.
DR Genevisible; Q8VCH9; MM.
DR GO; GO:0031012; C:extracellular matrix; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR000372; LRRNT.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF13855; LRR_8; 1.
DR Pfam; PF01462; LRRNT; 1.
DR SMART; SM00369; LRR_TYP; 3.
DR SMART; SM00013; LRRNT; 1.
DR PROSITE; PS51450; LRR; 3.
PE 2: Evidence at transcript level;
KW Glycoprotein; Leucine-rich repeat; Membrane; Reference proteome; Repeat;
KW Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..33
FT /evidence="ECO:0000255"
FT CHAIN 34..259
FT /note="Leucine-rich repeat-containing protein 3B"
FT /id="PRO_0000021617"
FT TRANSMEM 205..225
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 34..64
FT /note="LRRNT"
FT REPEAT 65..86
FT /note="LRR 1"
FT REPEAT 89..110
FT /note="LRR 2"
FT REPEAT 114..135
FT /note="LRR 3"
FT DOMAIN 145..197
FT /note="LRRCT"
FT CARBOHYD 47
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 94
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 259 AA; 29261 MW; 21BEF3D7680A9914 CRC64;
MNLVDLWLSR SLSMCLLLQS FVLMILCFHS ASMCPKGCLC SSSGGLNVTC SNANLKEIPR
DLPPETVLLY LDSNQITSIP NEIFKDLHQL RVLNLSKNGI EFIDEHAFKG VAETLQTLDL
SDNRIQSVHK NAFNNLKARA RIANNPWHCD CTLQQVLRSM ASNHETAHNV ICKTSVLDEH
AGRPFLNAAN DADLCNLPKK TTDYAMLVTM FGWFTMVISY VVYYVRQNQE DARRHLEYLK
SLPSRQKKAD EPDDISTVV