LRC51_PROCO
ID LRC51_PROCO Reviewed; 192 AA.
AC B6CZ54; B6CZ55;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 25-MAY-2022, entry version 28.
DE RecName: Full=Leucine-rich repeat-containing protein 51 {ECO:0000250|UniProtKB:Q96E66};
DE AltName: Full=Protein LRTOMT1 {ECO:0000303|PubMed:18953341};
GN Name=LRRC51 {ECO:0000250|UniProtKB:Q96E66};
GN Synonyms=LRTOMT {ECO:0000303|PubMed:18953341};
OS Propithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi
OS coquereli).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes;
OC Indriidae; Propithecus.
OX NCBI_TaxID=379532;
RN [1] {ECO:0000305, ECO:0000312|EMBL:ACF40895.1}
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
RC TISSUE=Brain {ECO:0000312|EMBL:ACF40895.1};
RX PubMed=18953341; DOI=10.1038/ng.245;
RA Ahmed Z.M., Masmoudi S., Kalay E., Belyantseva I.A., Mosrati M.A.,
RA Collin R.W.J., Riazuddin S., Hmani-Aifa M., Venselaar H., Kawar M.N.,
RA Tlili A., van der Zwaag B., Khan S.Y., Ayadi L., Riazuddin S.A.,
RA Morell R.J., Griffith A.J., Charfedine I., Caylan R., Oostrik J.,
RA Karaguzel A., Ghorbel A., Riazuddin S., Friedman T.B., Ayadi H., Kremer H.;
RT "Mutations of LRTOMT, a fusion gene with alternative reading frames, cause
RT nonsyndromic deafness in humans.";
RL Nat. Genet. 40:1335-1340(2008).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q9DAK8}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1 {ECO:0000269|PubMed:18953341}; Synonyms=A
CC {ECO:0000269|PubMed:18953341};
CC IsoId=B6CZ54-1; Sequence=Displayed;
CC Name=2 {ECO:0000269|PubMed:18953341}; Synonyms=B
CC {ECO:0000269|PubMed:18953341};
CC IsoId=B6CZ54-2; Sequence=VSP_053066, VSP_053067;
CC -!- MISCELLANEOUS: LRRC51 and TOMT were originally considered as
CC alternative reading frames, LRTOMT1 and LRTOMT2 of the same LRTOMT gene
CC in primates. {ECO:0000303|PubMed:18953341}.
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DR EMBL; EU627085; ACF40895.1; -; mRNA.
DR EMBL; EU627086; ACF40896.1; -; mRNA.
DR AlphaFoldDB; B6CZ54; -.
DR SMR; B6CZ54; -.
DR Proteomes; UP000233160; Whole Genome Shotgun Assembly.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR043196; LRTOMT1.
DR PANTHER; PTHR46545; PTHR46545; 1.
DR PROSITE; PS51450; LRR; 4.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cytoplasm; Leucine-rich repeat; Reference proteome;
KW Repeat.
FT CHAIN 1..192
FT /note="Leucine-rich repeat-containing protein 51"
FT /id="PRO_0000370743"
FT REPEAT 49..71
FT /note="LRR 1"
FT REPEAT 80..101
FT /note="LRR 2"
FT REPEAT 103..124
FT /note="LRR 3"
FT DOMAIN 137..175
FT /note="LRRCT"
FT VAR_SEQ 25..52
FT /note="VIQDLVNEEPRTGLRPLKRSKSGKSLTQ -> IIQGPNNFLQPECPLSSRQQ
FT HPAPGGGE (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:18953341"
FT /id="VSP_053066"
FT VAR_SEQ 53..192
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:18953341"
FT /id="VSP_053067"
SQ SEQUENCE 192 AA; 22160 MW; CD3A16A0DD1E82BD CRC64;
MNKRDYMNTS VQEPPLDYSF RSIHVIQDLV NEEPRTGLRP LKRSKSGKSL TQSLWLNNNV
LNDLRDFNQV ASQLLEHPEN LAWIDLSFND LTSIDPVLTT FFNLSVLYLH GNSIQHLGEV
NKLAVLPRLR SLTLHGNPME EEKGYRQYVL CTLPHITTFD FSGVTKADRT TAEVWKRMNI
KPKKARIKQN TL