LSM12_XENTR
ID LSM12_XENTR Reviewed; 194 AA.
AC Q6P833; Q5BKN9;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 02-OCT-2007, sequence version 2.
DT 03-AUG-2022, entry version 47.
DE RecName: Full=Protein LSM12;
GN Name=lsm12;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Nicotinic acid adenine dinucleotide phosphate (NAADP) binding
CC protein. {ECO:0000250|UniProtKB:Q3MHD2}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q3MHD2}.
CC -!- SIMILARITY: Belongs to the LSM12 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH61398.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=AAH91003.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; BC061398; AAH61398.1; ALT_FRAME; mRNA.
DR EMBL; BC091003; AAH91003.1; ALT_FRAME; mRNA.
DR RefSeq; NP_001032344.1; NM_001037267.1.
DR AlphaFoldDB; Q6P833; -.
DR DNASU; 394627; -.
DR GeneID; 394627; -.
DR KEGG; xtr:394627; -.
DR CTD; 124801; -.
DR Xenbase; XB-GENE-5780031; lsm12.
DR InParanoid; Q6P833; -.
DR OrthoDB; 1601482at2759; -.
DR Proteomes; UP000008143; Chromosome 10.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR InterPro; IPR019181; Anticodon-binding_dom.
DR InterPro; IPR039683; Lsm12-like.
DR PANTHER; PTHR13542; PTHR13542; 1.
DR Pfam; PF09793; AD; 1.
DR SMART; SM00995; AD; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome.
FT CHAIN 1..194
FT /note="Protein LSM12"
FT /id="PRO_0000305133"
FT REGION 173..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 177..194
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 139
FT /note="A -> V (in Ref. 1; AAH91003)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 194 AA; 21531 MW; E0F6D371623DD367 CRC64;
MAGPGEYFAI GAYVSCRTCQ ETRLQGEVVA FDYPSKMLAL KCPSSSGKPN HADILLLNLD
YVSDVEVINE RTQTPPPLAS LNITKLASRA RLEKEEKLSQ AYAISAGVSL DGQQLFQTIH
KTIKDCKWQE KNIVVMEEAV ISPPYQVENC KGKEGRALCH VCKIVEKHFI DMENQKGVQR
NPAQQSQKET STSS