LSM4_FAGSY
ID LSM4_FAGSY Reviewed; 148 AA.
AC Q9ZRU9;
DT 11-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 25-MAY-2022, entry version 68.
DE RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
DE AltName: Full=Glycine-rich protein 2;
GN Name=LSM4; Synonyms=GRP2;
OS Fagus sylvatica (Beechnut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fagales; Fagaceae; Fagus.
OX NCBI_TaxID=28930;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Seed;
RA Lorenzo O., Calvo A., Nicolas C., Nicolas G., Rodriguez D.;
RT "A Fagus sylvatica cDNA encoding a XET protein.";
RL Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds specifically to the 3'-terminal U-tract of U6 snRNA.
CC {ECO:0000250}.
CC -!- SUBUNIT: LSm subunits form a heteromer with a doughnut shape.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the snRNP Sm proteins family. {ECO:0000305}.
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DR EMBL; AJ130887; CAA10233.1; -; mRNA.
DR AlphaFoldDB; Q9ZRU9; -.
DR SMR; Q9ZRU9; -.
DR PRIDE; Q9ZRU9; -.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0000956; P:nuclear-transcribed mRNA catabolic process; IEA:InterPro.
DR CDD; cd01723; LSm4; 1.
DR InterPro; IPR034101; Lsm4.
DR InterPro; IPR027141; LSm4/Sm_D1/D3.
DR InterPro; IPR001163; LSM_dom_euk/arc.
DR InterPro; IPR010920; LSM_dom_sf.
DR PANTHER; PTHR23338; PTHR23338; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; SSF50182; 1.
PE 2: Evidence at transcript level;
KW mRNA processing; mRNA splicing; Nucleus; Ribonucleoprotein; RNA-binding;
KW Spliceosome.
FT CHAIN 1..148
FT /note="Probable U6 snRNA-associated Sm-like protein LSm4"
FT /id="PRO_0000125567"
FT REGION 80..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 80..110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 148 AA; 16348 MW; 0002A8C7FF024F63 CRC64;
MLPLSLLKTA QGHPMLVELK SGETYNGHLV NCDTWMNIHL REVICTSKDG DRFWRMPDCY
IRGNTIKYLR VPDEVIDKVQ EETKSRADRK PPGVGRGRGR GREEGSGARQ VRGAGRDVMM
QVAKAWVEVR GRGASAGKSG GRGGRGRG