LSU4_ARATH
ID LSU4_ARATH Reviewed; 92 AA.
AC Q8L8S2;
DT 02-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Protein RESPONSE TO LOW SULFUR 4 {ECO:0000303|PubMed:25628631};
GN Name=LSU4 {ECO:0000303|PubMed:25628631};
GN OrderedLocusNames=At5g24655 {ECO:0000312|Araport:AT5G24655};
GN ORFNames=K18P6 {ECO:0000305};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP FUNCTION, DISRUPTION PHENOTYPE, AND INDUCTION BY PHOSPHORUS; NITROGEN;
RP POTASSIUM AND IRON DEFICIENCY.
RC STRAIN=cv. Columbia;
RX PubMed=20848913; DOI=10.1134/s1607672909050093;
RA Myakushina Y.A., Milyaeva E.L., Romanov G.A., Nikiforova V.Y.;
RT "Mutation in LSU4 gene affects flower development in Arabidopsis
RT thaliana.";
RL Dokl. Biochem. Biophys. 428:257-260(2009).
RN [8]
RP REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=25628631; DOI=10.3389/fpls.2014.00774;
RA Sirko A., Wawrzynska A., Rodriguez M.C., Sektas P.;
RT "The family of LSU-like proteins.";
RL Front. Plant Sci. 5:774-774(2014).
CC -!- FUNCTION: Required for flower development in short-day conditions.
CC {ECO:0000269|PubMed:20848913}.
CC -!- INDUCTION: Accumulates in response to phosphorus, nitrogen, potassium,
CC or iron deficiency. {ECO:0000303|PubMed:20848913}.
CC -!- DISRUPTION PHENOTYPE: Defects in flower and inflorescence development
CC in short-day conditions and delayed flowering.
CC {ECO:0000269|PubMed:20848913}.
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DR EMBL; AB010068; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93345.1; -; Genomic_DNA.
DR EMBL; BT008617; AAP40439.1; -; mRNA.
DR EMBL; BT020287; AAV84508.1; -; mRNA.
DR EMBL; AK229590; BAF01438.1; -; mRNA.
DR EMBL; AY088844; AAM67151.1; -; mRNA.
DR RefSeq; NP_568450.1; NM_122374.4.
DR AlphaFoldDB; Q8L8S2; -.
DR SMR; Q8L8S2; -.
DR STRING; 3702.AT5G24655.1; -.
DR PaxDb; Q8L8S2; -.
DR PRIDE; Q8L8S2; -.
DR EnsemblPlants; AT5G24655.1; AT5G24655.1; AT5G24655.
DR GeneID; 832537; -.
DR Gramene; AT5G24655.1; AT5G24655.1; AT5G24655.
DR KEGG; ath:AT5G24655; -.
DR Araport; AT5G24655; -.
DR TAIR; locus:505006636; AT5G24655.
DR eggNOG; ENOG502SZ0Q; Eukaryota.
DR HOGENOM; CLU_152833_0_0_1; -.
DR InParanoid; Q8L8S2; -.
DR OMA; EERLCFQ; -.
DR OrthoDB; 1598998at2759; -.
DR PhylomeDB; Q8L8S2; -.
DR PRO; PR:Q8L8S2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8L8S2; baseline and differential.
DR GO; GO:0098869; P:cellular oxidant detoxification; IEA:InterPro.
DR GO; GO:0009909; P:regulation of flower development; IMP:UniProtKB.
DR GO; GO:0048587; P:regulation of short-day photoperiodism, flowering; IMP:UniProtKB.
DR InterPro; IPR039282; LSU.
DR PANTHER; PTHR34283; PTHR34283; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..92
FT /note="Protein RESPONSE TO LOW SULFUR 4"
FT /id="PRO_0000437695"
FT DOMAIN 14..61
FT /note="Death"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00064"
FT COILED 8..63
FT /evidence="ECO:0000255"
SQ SEQUENCE 92 AA; 10563 MW; 0E8FE6CD4D565307 CRC64;
MGKGGNYVMV AASEVEELRQ KNGEMEKAVE EMRKEMLQLW RRTQVAEEAE EHLCSQLAEL
EAESLDQARD YHTRIIFLTN QLSRFSSDSA SP
