LTACT_BPT4
ID LTACT_BPT4 Reviewed; 112 AA.
AC P13338;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1990, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Late transcription coactivator {ECO:0000255|HAMAP-Rule:MF_04165, ECO:0000303|PubMed:22135460};
DE AltName: Full=Gene product 33;
DE Short=gp33;
DE AltName: Full=RNA polymerase-associated protein Gp33 {ECO:0000255|HAMAP-Rule:MF_04165};
GN Name=33;
OS Enterobacteria phage T4 (Bacteriophage T4).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Myoviridae; Tevenvirinae; Tequatrovirus.
OX NCBI_TaxID=10665;
OH NCBI_TaxID=562; Escherichia coli.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=BK536;
RX PubMed=2674900; DOI=10.1093/nar/17.16.6729;
RA Hahn S., Rueger W.;
RT "Organization of the bacteriophage T4 genome between map positions 150.745
RT and 145.824.";
RL Nucleic Acids Res. 17:6729-6729(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12626685; DOI=10.1128/mmbr.67.1.86-156.2003;
RA Miller E.S., Kutter E., Mosig G., Arisaka F., Kunisawa T., Ruger W.;
RT "Bacteriophage T4 genome.";
RL Microbiol. Mol. Biol. Rev. 67:86-156(2003).
RN [3]
RP DOMAIN, INTERACTION WITH HOST RNAP, AND FUNCTION.
RX PubMed=8106327; DOI=10.1128/jb.176.4.1164-1171.1994;
RA Winkelman J.W., Kassavetis G.A., Geiduschek E.P.;
RT "Molecular genetic analysis of a prokaryotic transcriptional coactivator:
RT functional domains of the bacteriophage T4 gene 33 protein.";
RL J. Bacteriol. 176:1164-1171(1994).
RN [4] {ECO:0007744|PDB:3TBI}
RP X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS), AND INTERACTION WITH HOST RPOB.
RX PubMed=22135460; DOI=10.1073/pnas.1113328108;
RA Twist K.A., Campbell E.A., Deighan P., Nechaev S., Jain V.,
RA Geiduschek E.P., Hochschild A., Darst S.A.;
RT "Crystal structure of the bacteriophage T4 late-transcription coactivator
RT gp33 with the beta-subunit flap domain of Escherichia coli RNA
RT polymerase.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:19961-19966(2011).
RN [5] {ECO:0007744|PDB:7D7D}
RP STRUCTURE BY ELECTRON MICROSCOPY (4.50 ANGSTROMS), IDENTIFICATION IN THE
RP TRANSCRIPTION ACTIVATION COMPLEX, INTERACTION WITH HOST RNAP, AND FUNCTION.
RX PubMed=33602900; DOI=10.1038/s41467-021-21392-0;
RA Shi J., Wen A., Jin S., Gao B., Huang Y., Feng Y.;
RT "Transcription activation by a sliding clamp.";
RL Nat. Commun. 12:1131-1131(2021).
CC -!- FUNCTION: Activates transcription at late promoters when the sliding
CC clamp is present (PubMed:33602900). Binds to both the host RNA
CC polymerase (RNAP) and the upstream dsDNA (PubMed:33602900,
CC PubMed:8106327). {ECO:0000255|HAMAP-Rule:MF_04165,
CC ECO:0000269|PubMed:33602900, ECO:0000269|PubMed:8106327}.
CC -!- SUBUNIT: Interacts with the beta subunit of host RNAP RpoB (via flap
CC domain) (PubMed:33602900, PubMed:22135460). Part of the transcription
CC activation complex containing host RNAP, the viral RNA polymerase
CC sigma-like factor, the coactivator gp33, and the sliding clamp
CC (PubMed:33602900). {ECO:0000255|HAMAP-Rule:MF_04165,
CC ECO:0000269|PubMed:22135460, ECO:0000269|PubMed:33602900}.
CC -!- INTERACTION:
CC P13338; P0A8V2: rpoB; Xeno; NbExp=5; IntAct=EBI-15955782, EBI-544996;
CC -!- DOMAIN: The C-terminus is involved in transcriptional enhancement.
CC {ECO:0000255|HAMAP-Rule:MF_04165, ECO:0000269|PubMed:8106327}.
CC -!- SIMILARITY: Belongs to the Tevenvirinae late transcription coactivator
CC family. {ECO:0000255|HAMAP-Rule:MF_04165}.
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DR EMBL; X15818; CAA33814.1; -; Genomic_DNA.
DR EMBL; AF158101; AAD42456.1; -; Genomic_DNA.
DR PIR; S05558; GWBPT4.
DR RefSeq; NP_049857.1; NC_000866.4.
DR PDB; 3TBI; X-ray; 3.00 A; A=1-112.
DR PDB; 7D7D; EM; 4.50 A; K=1-112.
DR PDBsum; 3TBI; -.
DR PDBsum; 7D7D; -.
DR SMR; P13338; -.
DR DIP; DIP-60377N; -.
DR IntAct; P13338; 1.
DR PRIDE; P13338; -.
DR GeneID; 1258793; -.
DR KEGG; vg:1258793; -.
DR Proteomes; UP000009087; Genome.
DR DisProt; DP00898; -.
DR Gene3D; 1.10.10.2850; -; 1.
DR HAMAP; MF_04165; T4_TRANSCR_COACT; 1.
DR InterPro; IPR046384; LTACT_myovirus.
DR InterPro; IPR031836; Trans_coact.
DR InterPro; IPR042071; Trans_coact_sf.
DR Pfam; PF16805; Trans_coact; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..112
FT /note="Late transcription coactivator"
FT /id="PRO_0000165019"
FT REGION 62..92
FT /note="Interaction with host RNAP"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04165,
FT ECO:0000269|PubMed:8106327"
FT REGION 106..112
FT /note="Involved in transcriptional enhancement"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04165,
FT ECO:0000269|PubMed:8106327"
FT HELIX 37..50
FT /evidence="ECO:0007829|PDB:3TBI"
FT HELIX 55..65
FT /evidence="ECO:0007829|PDB:3TBI"
FT HELIX 70..72
FT /evidence="ECO:0007829|PDB:3TBI"
FT HELIX 73..76
FT /evidence="ECO:0007829|PDB:3TBI"
FT HELIX 79..92
FT /evidence="ECO:0007829|PDB:3TBI"
FT HELIX 97..101
FT /evidence="ECO:0007829|PDB:3TBI"
SQ SEQUENCE 112 AA; 12831 MW; 665443899373E04A CRC64;
MTQFSLNDIR PVDETGLSEK ELSIKKEKDE IAKLLDRQEN GFIIEKMVEE FGMSYLEATT
AFLEENSIPE TQFAKFIPSG IIEKIQSEAI DENLLRPSVV RCEKTNTLDF LL