LTG33_ARATH
ID LTG33_ARATH Reviewed; 140 AA.
AC O49645; Q9SUV7;
DT 02-DEC-2020, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Non-specific lipid transfer protein GPI-anchored 33 {ECO:0000303|PubMed:23893219};
DE Short=AtLTPG-33 {ECO:0000303|PubMed:23893219};
DE Short=Protein LTP-GPI-ANCHORED 33 {ECO:0000303|PubMed:23893219};
DE Flags: Precursor;
GN Name=LTPG33 {ECO:0000303|PubMed:23893219};
GN OrderedLocusNames=At4g22640 {ECO:0000312|Araport:AT4G22640};
GN ORFNames=T12H17.30 {ECO:0000312|EMBL:CAA16549.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=23893219; DOI=10.1007/s11103-013-0113-5;
RA Edstam M.M., Blomqvist K., Ekloef A., Wennergren U., Edqvist J.;
RT "Coexpression patterns indicate that GPI-anchored non-specific lipid
RT transfer proteins are involved in accumulation of cuticular wax, suberin
RT and sporopollenin.";
RL Plant Mol. Biol. 83:625-649(2013).
CC -!- FUNCTION: Probable lipid transfer protein.
CC {ECO:0000250|UniProtKB:Q9C7F7}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000255}; Lipid-anchor, GPI-
CC anchor {ECO:0000255}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=O49645-1; Sequence=Displayed;
CC Name=2;
CC IsoId=O49645-2; Sequence=VSP_060826;
CC -!- SIMILARITY: Belongs to the plant LTP family. {ECO:0000305}.
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DR EMBL; AL021635; CAA16549.1; -; Genomic_DNA.
DR EMBL; AL033545; CAA22169.1; -; Genomic_DNA.
DR EMBL; AL161557; CAB79219.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE84633.1; -; Genomic_DNA.
DR EMBL; CP002687; ANM66157.1; -; Genomic_DNA.
DR EMBL; BT010802; AAR24169.1; -; mRNA.
DR EMBL; BT011284; AAR92320.1; -; mRNA.
DR PIR; C85259; C85259.
DR PIR; T04559; T04559.
DR RefSeq; NP_001328070.1; NM_001341557.1. [O49645-1]
DR RefSeq; NP_193995.1; NM_118390.3. [O49645-2]
DR AlphaFoldDB; O49645; -.
DR PRIDE; O49645; -.
DR ProteomicsDB; 185213; -. [O49645-1]
DR ProteomicsDB; 193665; -.
DR EnsemblPlants; AT4G22640.1; AT4G22640.1; AT4G22640. [O49645-2]
DR EnsemblPlants; AT4G22640.2; AT4G22640.2; AT4G22640. [O49645-1]
DR GeneID; 828360; -.
DR Gramene; AT4G22640.1; AT4G22640.1; AT4G22640. [O49645-2]
DR Gramene; AT4G22640.2; AT4G22640.2; AT4G22640. [O49645-1]
DR KEGG; ath:AT4G22640; -.
DR Araport; AT4G22640; -.
DR TAIR; locus:2127580; AT4G22640.
DR HOGENOM; CLU_138794_0_0_1; -.
DR OMA; VYHNDCG; -.
DR OrthoDB; 1522870at2759; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O49645; baseline and differential.
DR GO; GO:0031225; C:anchored component of membrane; TAS:TAIR.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR036312; Bifun_inhib/LTP/seed_sf.
DR InterPro; IPR016140; Bifunc_inhib/LTP/seed_store.
DR Pfam; PF14368; LTP_2; 1.
DR SUPFAM; SSF47699; SSF47699; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cell membrane; Disulfide bond; Glycoprotein;
KW GPI-anchor; Lipoprotein; Membrane; Reference proteome; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..115
FT /note="Non-specific lipid transfer protein GPI-anchored 33"
FT /evidence="ECO:0000255"
FT /id="PRO_5015096782"
FT PROPEP 116..140
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000451662"
FT LIPID 115
FT /note="GPI-anchor amidated glycine"
FT /evidence="ECO:0000255"
FT CARBOHYD 91
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT DISULFID 40..80
FT /evidence="ECO:0000250|UniProtKB:A0A0B4JDK1"
FT DISULFID 52..64
FT /evidence="ECO:0000250|UniProtKB:A0A0B4JDK1"
FT DISULFID 65..104
FT /evidence="ECO:0000250|UniProtKB:A0A0B4JDK1"
FT DISULFID 78..112
FT /evidence="ECO:0000250|UniProtKB:A0A0B4JDK1"
FT VAR_SEQ 115..139
FT /note="GDASGGSTNKIAASMVLLGLVASLF -> I (in isoform 2)"
FT /id="VSP_060826"
SQ SEQUENCE 140 AA; 14753 MW; 9770BC193B41C234 CRC64;
MAYTNKVTIS AAVATMMLFL AVTIVDAQSM PPMPKFNPVC ALADLPNIVQ LCYFNLDLTP
SEECCNDLKS SSTIQVNCLC DNFIAHPSNG NISQARYDLV NSACGVADKF ACKGGDASGG
STNKIAASMV LLGLVASLFF
