LTV1_DANRE
ID LTV1_DANRE Reviewed; 469 AA.
AC Q5U3J8; Q6DRP7;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=Protein LTV1 homolog;
GN Name=ltv1; ORFNames=zgc:103432;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15256591; DOI=10.1073/pnas.0403929101;
RA Amsterdam A., Nissen R.M., Sun Z., Swindell E.C., Farrington S.,
RA Hopkins N.;
RT "Identification of 315 genes essential for early zebrafish development.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:12792-12797(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Heart;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LTV1 family. {ECO:0000305}.
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DR EMBL; AY648712; AAT68030.1; -; mRNA.
DR EMBL; BC085516; AAH85516.1; -; mRNA.
DR AlphaFoldDB; Q5U3J8; -.
DR STRING; 7955.ENSDARP00000017491; -.
DR PRIDE; Q5U3J8; -.
DR ZFIN; ZDB-GENE-040712-1; ltv1.
DR eggNOG; KOG2637; Eukaryota.
DR InParanoid; Q5U3J8; -.
DR PhylomeDB; Q5U3J8; -.
DR Reactome; R-DRE-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:Q5U3J8; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0030688; C:preribosome, small subunit precursor; IBA:GO_Central.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IBA:GO_Central.
DR GO; GO:0000056; P:ribosomal small subunit export from nucleus; IBA:GO_Central.
DR InterPro; IPR007307; Ltv1.
DR PANTHER; PTHR21531; PTHR21531; 1.
DR Pfam; PF04180; LTV; 2.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..469
FT /note="Protein LTV1 homolog"
FT /id="PRO_0000302817"
FT REGION 88..112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 175..219
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 298..329
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 394..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 444..467
FT /evidence="ECO:0000255"
FT COMPBIAS 88..110
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..208
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 313..329
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..426
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 427..442
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 91
FT /note="T -> A (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 103
FT /note="K -> E (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 107
FT /note="S -> G (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 110
FT /note="S -> P (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 175
FT /note="S -> N (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 184
FT /note="E -> GGEDD (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 324
FT /note="D -> DE (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 335
FT /note="E -> K (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
FT CONFLICT 437
FT /note="K -> E (in Ref. 1; AAT68030)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 469 AA; 54209 MW; 9E3A0732CE98F6BA CRC64;
MPHRKKKSFI NKKNAVSFHL VHRSQKDPLA ADETAPQHVL LPTVRVELEK RKEEQRNFGV
FFDDDYDYLQ HLRESTQTAE LISAPRVRRD TRLKPADDEE HMKEEDSSVS EASIKLPSSV
FASEFEEEVG LLNKAAPISG PRLDMDPDIV AALDEDFDFD DPENMLEDDF IIKASDVMGG
GGGEDDDEWE DTDDDDGEEQ DFDSEAGLSD DEEGGRREFM FADCETKTRF TEYSLTSSVM
RRNEQLTLLD DRFDEFYKQF DDDEIGALDN AELEGYIEPD SARLEEVIKD YFIQKEKDCQ
KPDQLGPAEL PSVREEDEED EDADEELETE RMVIEPPAER WDCETIISTY SNLYNRPKLI
QDPPKPKQIR VSSKSGIPLD VLPKRGLTVK QVERMERIND SDLPRVSTQP RSRDENTEER
KARKQAIKSE RKERRTKKKA NKLAFKQEKQ MQEKQMVHLR ANVQGMKLS