LVSC_DICDI
ID LVSC_DICDI Reviewed; 2491 AA.
AC Q54U63; Q8IHK9;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 18-MAR-2008, sequence version 2.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=BEACH domain-containing protein lvsC;
GN Name=lvsC; ORFNames=DDB_G0280971;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=NC4A2;
RX PubMed=12210762; DOI=10.1002/jcb.10254;
RA Wang N., Wu W.I., De Lozanne A.;
RT "BEACH family of proteins: phylogenetic and functional analysis of six
RT Dictyostelium BEACH proteins.";
RL J. Cell. Biochem. 86:561-570(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN38986.1; Type=Miscellaneous discrepancy; Evidence={ECO:0000305};
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DR EMBL; AY159039; AAN38986.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AAFI02000040; EAL66782.2; -; Genomic_DNA.
DR RefSeq; XP_640913.2; XM_635821.2.
DR AlphaFoldDB; Q54U63; -.
DR SMR; Q54U63; -.
DR STRING; 44689.DDB0233044; -.
DR PaxDb; Q54U63; -.
DR EnsemblProtists; EAL66782; EAL66782; DDB_G0280971.
DR GeneID; 8622975; -.
DR KEGG; ddi:DDB_G0280971; -.
DR dictyBase; DDB_G0280971; lvsC.
DR eggNOG; KOG1787; Eukaryota.
DR HOGENOM; CLU_000307_0_0_1; -.
DR InParanoid; Q54U63; -.
DR OMA; EANQEEM; -.
DR PRO; PR:Q54U63; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0019901; F:protein kinase binding; IBA:GO_Central.
DR GO; GO:0008104; P:protein localization; IBA:GO_Central.
DR CDD; cd06071; Beach; 1.
DR CDD; cd01201; PH_BEACH; 1.
DR Gene3D; 1.10.1540.10; -; 1.
DR Gene3D; 2.130.10.10; -; 2.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000409; BEACH_dom.
DR InterPro; IPR036372; BEACH_dom_sf.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR031570; NBEA/BDCP_DUF4704.
DR InterPro; IPR023362; PH-BEACH_dom.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF02138; Beach; 1.
DR Pfam; PF15787; DUF4704; 1.
DR Pfam; PF14844; PH_BEACH; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM01026; Beach; 1.
DR SMART; SM00320; WD40; 4.
DR SUPFAM; SSF48371; SSF48371; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR SUPFAM; SSF50978; SSF50978; 1.
DR SUPFAM; SSF81837; SSF81837; 1.
DR PROSITE; PS50197; BEACH; 1.
DR PROSITE; PS51783; PH_BEACH; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Reference proteome; Repeat; WD repeat.
FT CHAIN 1..2491
FT /note="BEACH domain-containing protein lvsC"
FT /id="PRO_0000327709"
FT DOMAIN 1701..1818
FT /note="BEACH-type PH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01119"
FT DOMAIN 1828..2118
FT /note="BEACH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00026"
FT REPEAT 2259..2298
FT /note="WD 1"
FT REPEAT 2311..2352
FT /note="WD 2"
FT REPEAT 2354..2393
FT /note="WD 3"
FT REPEAT 2394..2436
FT /note="WD 4"
FT REPEAT 2438..2475
FT /note="WD 5"
FT REGION 1095..1150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1421..1441
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1620..1644
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1738..1761
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1740..1761
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2491 AA; 283704 MW; 0EBEB60185D25F9D CRC64;
MLDGIRQIIK NNPKKQNLFK KFRVFIKIVN LVNADDKKER LSVLCHSVLR TVILLMANNP
KIKKHFRNHI GYDTIKDLII KSEGIVSETT MNILFDMIVD GEFDIEYKYV IQNPDSCLLI
FNLLKYFPTK LQHEILDRFT VMVEKCTTNQ SVCCNCHLIY NLLEAIYKGQ PMEVTTKILK
LIERLGIHSV TVRELKKLFG LLKSEQGDYL PPTTSALLTT LQNISNSRNP GPQVYFDFDG
KDSCIILPTF DKWPFPKGFS FCTWVRIESF VDPTGTPEYK PRLFSFLSDS GCGIEVLFIY
QQLQVLTVNN HQSKAVFQSP PTFVEREWYF VSVVYSINLI SSNEIRIYIN GQQSAKSSIK
LNISGTLWNH FKIGNNSKKM SGERECPLYG QMGAFNIFDE SLSPSQIQAI YTLGPNFNTS
FQDVEGSTKS AHTFESSLTS HLFLNYNCRA LDGDLCLDNT PDIGGDKNYD ATLVSINPCV
SRDIKDIIYC LGGIKVLFPL IQQINNPISP LSLELITNEN NNNNNNNLSL SSQQQTLEQL
QQSINIKLTN QVLALFKFML KESEANQEEM LRCQGFSVMG YLLQQISPEY LTIGCTNIFI
DMSNQISDPT LVEEVYSNLM LNFCIWIKTK YELQRNLLVI IKQIVFEKYD QVSDIITVQL
ILDIMNDFYW YDDSKNEAHR NHHFFNKDIL SKRPSISNIR ELRQILFEVL RILLRHQKST
DIQAIIKFLI YCKDYQQLIE MMEFVLGLNG NGHNCQQFFD EIMGLGGTDV FLTLLKIDDE
GVRNTAIQLI SKIHGLCNHS QNKKHKANLF QDSIIITRCL HTFPMTEETF RYLLSFAMGY
DFTPANSTSH NNGQMVPPCL DKHKVIKNNE ILSVIFKLLS NTDVILVQTV LQEIKLYISN
EESSHVNRNA CLSIDKWFDH LFAIISSVEK TDTQYSNVTD LIIDIIKILV IHSFDESKGI
QKTLEIVLAT LRPYDERGVL DYHSLARTLF LNIVQSIKSK ALTTIGDNQS PLKKSKKAFI
ENLIQFFILT EEFIFYSPKG GNHDLHSSLS SIRTSILGGG GGFNEFGIGS STIVTSSAHS
ASSSVHSSFD GSFSPSSPQL LSSSTSSTSQ LQQQQQLQQL QQLQQQGQSK SGSNTPSNSN
HGSYNYNNNN SPNLISSSNS LLNSPSSIGQ SLSSSFSLSS SSKEVNIGGG GGIGGFSKLH
YNSETKEWED TLLVKEILDL VDTLKLLDNL SESDFSTSNI QATTSKSTSN LMFTTHYHRI
FLRFTLEAIK ICNKQEPLQT LMSHVMRLKT LSEKDRQKVE NDTMSNNRLT FILSHLAKAL
RSIIDLNLPL HQKALVPLMK DIIRKLNSTL ISTLSKQQQQ QQQQQQQQQQ QQQQQQQQQI
HQHQSVSGPL NLYQLSLPQS ALSQSQQFII QQTQQILNGV GVGAGNSSPS SSSSSSSNSV
NIDQSEISGW VEELTDSSRI VEFCSIVVTS PRWSQIVQYI DNQTYFTTVE EKSLYSWLEK
RKKKLTKVVL NTDEKEAESF NAAERKADND LNSIHVKLWM PECERRALHL YKARELRNQT
TVQWRKILRS LTNERGPWGT TESIVHWKLD KTENSSRMRI KLKRNYKFDE HLNCAINDSE
IQDDHNNSNS NNNNDSNNSD GEHLSESANL LSIKPNEKQQ QQQQSDEVDS DWTMVPKDID
SEENIDSLIQ QQQQQQHQQQ KEKEKLIYST SCHWITPSSC KKGKLEITTF NLIFTEEEEL
PPPSTTTTNT TNTTNTNSTT NDSTFLKIKR WPNEMIKDVH LRRYLLRGSA IEIFMRDKTN
YLFNFKKNER NKVYNKINSV KREFSKEPTL SPSDMLKKAT SEWQARRISN FDYLMTLNTI
AGRTYNDLTQ YPVFPWVIAD YTSPVLDLNK AETFRDLSKP IGALNEKRLE IFKDRYESFD
DPVIPKFYYG SHYSSAGIVL FYLIRLEPFT TQFLNLQGGR FDHPDRMFDS IALAWDNSLT
SSTDVKELIP EFYYMPEFLT NHNHINFGIK QNGIGIEDVL LPPWASSPSD FIRINREALE
SDYVSSHLHE WIDLIFGIKQ RGKQAKEVFN VFYYLTYEGS VDIDSIEDET TRRATESQIN
NFGQTPTQLF SKKHHIQRDP LNESHISILK TPPNQLQAYF LKITNKNPIV YVYIPEPNPI
MSYLVADKVT VIDKSRTTTN HKWFPSTPND KISPFTFELD PSSTTKRRIG LPFANDVTIS
PNCFAITSDG RYVISCAHWD NSFKLSFVDS AKLIQSVVKH KDTVTCLSLA SDGQTLITGS
KDTTVMVWRI ATTNKSGAPK FNDVPDHILY GHDDEITCVD VNVGLDISIS GSKDGTCIIH
NLKHGEYVRS IYLPRQSPIS LIAISNQGYI VIYSQADLMI YLYSINGGLL KTVDTHERLH
SIIISKDSEY LITGGERGVV VIRTLFNLKP TNHKLVFGTP IHSLAMASDQ KHLMVGLEDG
RLLIIASNSA SPPTNYYSIT KFLIFITFII Q