LY65C_MOUSE
ID LY65C_MOUSE Reviewed; 149 AA.
AC Q8K1T5; Q0D2G4;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Lymphocyte antigen 6 complex locus protein G5c;
DE Flags: Precursor;
GN Name=Ly6g5c;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=129;
RX PubMed=12079290; DOI=10.1006/geno.2002.6794;
RA Mallya M., Campbell R.D., Aguado B.;
RT "Transcriptional analysis of a novel cluster of LY-6 family members in the
RT human and mouse major histocompatibility complex: five genes with many
RT splice forms.";
RL Genomics 80:113-123(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP GLYCOSYLATION, AND SUBUNIT.
RX PubMed=17008713; DOI=10.1110/ps.062242606;
RA Mallya M., Campbell R.D., Aguado B.;
RT "Characterization of the five novel Ly-6 superfamily members encoded in the
RT MHC, and detection of cells expressing their potential ligands.";
RL Protein Sci. 15:2244-2256(2006).
CC -!- FUNCTION: May have a role in hematopoietic cell differentiation.
CC -!- SUBUNIT: Forms oligomers. {ECO:0000269|PubMed:17008713}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Detected in adult brain.
CC {ECO:0000269|PubMed:12079290}.
CC -!- PTM: N-glycosylated. {ECO:0000269|PubMed:17008713}.
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DR EMBL; AJ315552; CAC85548.1; -; mRNA.
DR EMBL; BC111447; AAI11448.1; -; mRNA.
DR EMBL; BC145966; AAI45967.1; -; mRNA.
DR EMBL; BC145968; AAI45969.1; -; mRNA.
DR CCDS; CCDS28682.1; -.
DR RefSeq; NP_683749.1; NM_148947.1.
DR AlphaFoldDB; Q8K1T5; -.
DR STRING; 10090.ENSMUSP00000039151; -.
DR GlyGen; Q8K1T5; 1 site.
DR PaxDb; Q8K1T5; -.
DR PRIDE; Q8K1T5; -.
DR ProteomicsDB; 291970; -.
DR Antibodypedia; 50054; 29 antibodies from 13 providers.
DR DNASU; 114652; -.
DR Ensembl; ENSMUST00000037849; ENSMUSP00000039151; ENSMUSG00000034482.
DR GeneID; 114652; -.
DR KEGG; mmu:114652; -.
DR UCSC; uc008cfr.1; mouse.
DR CTD; 80741; -.
DR MGI; MGI:2148974; Ly6g5c.
DR VEuPathDB; HostDB:ENSMUSG00000034482; -.
DR eggNOG; ENOG502TD7Y; Eukaryota.
DR GeneTree; ENSGT00390000011513; -.
DR HOGENOM; CLU_148118_0_0_1; -.
DR InParanoid; Q8K1T5; -.
DR OMA; QHRGHYI; -.
DR OrthoDB; 1440854at2759; -.
DR PhylomeDB; Q8K1T5; -.
DR TreeFam; TF338717; -.
DR BioGRID-ORCS; 114652; 4 hits in 73 CRISPR screens.
DR ChiTaRS; Ly6g5c; mouse.
DR PRO; PR:Q8K1T5; -.
DR Proteomes; UP000000589; Chromosome 17.
DR RNAct; Q8K1T5; protein.
DR Bgee; ENSMUSG00000034482; Expressed in lung and 4 other tissues.
DR GO; GO:0009897; C:external side of plasma membrane; ISO:MGI.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0032991; C:protein-containing complex; IDA:UniProtKB.
DR GO; GO:0042802; F:identical protein binding; IDA:UniProtKB.
DR InterPro; IPR026110; LY6G5C.
DR PANTHER; PTHR14909; PTHR14909; 1.
PE 1: Evidence at protein level;
KW Disulfide bond; Glycoprotein; Reference proteome; Secreted; Signal.
FT SIGNAL 1..41
FT /evidence="ECO:0000255"
FT CHAIN 42..149
FT /note="Lymphocyte antigen 6 complex locus protein G5c"
FT /id="PRO_0000323018"
FT DOMAIN 59..149
FT /note="UPAR/Ly6"
FT CARBOHYD 95
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 61..88
FT /evidence="ECO:0000250"
FT DISULFID 64..73
FT /evidence="ECO:0000250"
FT DISULFID 80..106
FT /evidence="ECO:0000250"
FT DISULFID 115..132
FT /evidence="ECO:0000250"
FT DISULFID 133..138
FT /evidence="ECO:0000250"
SQ SEQUENCE 149 AA; 16590 MW; 58AF992A36F1A6B6 CRC64;
MLFMAGPAAS WSLRPLGLHG VPQALCAVLL TVLVMKTLVL GDTKLEDLHP QSLPLNKYLN
CYRCLLETEE LGCLLGSDTC LTPLGSSCVT LHIKNSSGFN VMVSDCYSKE QMVHCSYTRA
SPVFGFWIFY QCCFLDFCNN PDNRKNSMH