LY65C_RAT
ID LY65C_RAT Reviewed; 145 AA.
AC Q8CHN2; Q6MG54;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 71.
DE RecName: Full=Lymphocyte antigen 6 complex locus protein G5c;
DE AltName: Full=Epididymal secretory protein 8;
DE Short=Protein RE8;
DE Flags: Precursor;
GN Name=Ly6g5c; Synonyms=Re8;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=Sprague-Dawley;
RX PubMed=14695977;
RA Kaepler-Hanno K., Kirchhoff C.;
RT "Rodent epididymal cDNAs identified by sequence homology to human and
RT canine counterparts.";
RL Asian J. Androl. 5:277-286(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway;
RX PubMed=15060004; DOI=10.1101/gr.1987704;
RA Hurt P., Walter L., Sudbrak R., Klages S., Mueller I., Shiina T., Inoko H.,
RA Lehrach H., Guenther E., Reinhardt R., Himmelbauer H.;
RT "The genomic sequence and comparative analysis of the rat major
RT histocompatibility complex.";
RL Genome Res. 14:631-639(2004).
CC -!- FUNCTION: May have a role in hematopoietic cell differentiation.
CC {ECO:0000250}.
CC -!- SUBUNIT: Forms oligomers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expression restricted to the caput of epididymis.
CC Detected only from day 24 postnatum. {ECO:0000269|PubMed:14695977}.
CC -!- PTM: N-glycosylated. {ECO:0000250}.
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DR EMBL; AJ515240; CAD56202.1; -; mRNA.
DR EMBL; BX883045; CAE83992.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8CHN2; -.
DR STRING; 10116.ENSRNOP00000001122; -.
DR GlyGen; Q8CHN2; 1 site.
DR PaxDb; Q8CHN2; -.
DR UCSC; RGD:735180; rat.
DR RGD; 735180; Ly6g5c.
DR eggNOG; ENOG502TD7Y; Eukaryota.
DR InParanoid; Q8CHN2; -.
DR PhylomeDB; Q8CHN2; -.
DR PRO; PR:Q8CHN2; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0032991; C:protein-containing complex; ISO:RGD.
DR GO; GO:0042802; F:identical protein binding; ISO:RGD.
DR InterPro; IPR026110; LY6G5C.
DR PANTHER; PTHR14909; PTHR14909; 1.
PE 2: Evidence at transcript level;
KW Disulfide bond; Glycoprotein; Reference proteome; Secreted; Signal.
FT SIGNAL 1..38
FT /evidence="ECO:0000255"
FT CHAIN 39..145
FT /note="Lymphocyte antigen 6 complex locus protein G5c"
FT /id="PRO_5000069914"
FT DOMAIN 55..145
FT /note="UPAR/Ly6"
FT CARBOHYD 91
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 57..84
FT /evidence="ECO:0000250"
FT DISULFID 60..69
FT /evidence="ECO:0000250"
FT DISULFID 76..102
FT /evidence="ECO:0000250"
FT DISULFID 111..128
FT /evidence="ECO:0000250"
FT DISULFID 129..134
FT /evidence="ECO:0000250"
FT CONFLICT 40
FT /note="T -> N (in Ref. 2; CAE83992)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 145 AA; 15985 MW; 093A3AFA2CB07800 CRC64;
MSGLAASWSL KPLGPHGVTQ ALCAVLLAVL VTMNVVLGDT LLDIPSQSPP LNQYLHCYRC
LLETEELGCL LGSDTCLTPL GSTCVTLHIK NSSGFNVMVS DCRNKEQMVD CSYTRASPVF
GFWIFYQCCF LDFCNNPKNR KNTMH