LYRM2_DANRE
ID LYRM2_DANRE Reviewed; 88 AA.
AC Q5RIM0;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=LYR motif-containing protein 2;
GN Name=lyrm2; ORFNames=si:dkey-181i3.3;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Larva;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the complex I LYR family. {ECO:0000305}.
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DR EMBL; BX248418; CAI20771.1; -; Genomic_DNA.
DR EMBL; BC124395; AAI24396.1; -; mRNA.
DR RefSeq; NP_001153303.1; NM_001159831.2.
DR AlphaFoldDB; Q5RIM0; -.
DR SMR; Q5RIM0; -.
DR STRING; 7955.ENSDARP00000041191; -.
DR PaxDb; Q5RIM0; -.
DR Ensembl; ENSDART00000041192; ENSDARP00000041191; ENSDARG00000033138.
DR GeneID; 569076; -.
DR KEGG; dre:569076; -.
DR CTD; 57226; -.
DR ZFIN; ZDB-GENE-040914-27; lyrm2.
DR eggNOG; ENOG502S8DG; Eukaryota.
DR GeneTree; ENSGT00940000165360; -.
DR HOGENOM; CLU_151409_1_1_1; -.
DR InParanoid; Q5RIM0; -.
DR OMA; MMITQAS; -.
DR OrthoDB; 1575118at2759; -.
DR PhylomeDB; Q5RIM0; -.
DR TreeFam; TF323797; -.
DR PRO; PR:Q5RIM0; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 20.
DR Bgee; ENSDARG00000033138; Expressed in muscle tissue and 23 other tissues.
DR CDD; cd20262; Complex1_LYR_LYRM2; 1.
DR InterPro; IPR008011; Complex1_LYR_dom.
DR InterPro; IPR045293; Complex1_LYR_LYRM2.
DR Pfam; PF05347; Complex1_LYR; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..88
FT /note="LYR motif-containing protein 2"
FT /id="PRO_0000359763"
SQ SEQUENCE 88 AA; 10490 MW; AB8CF3A13921F436 CRC64;
MAVSRLPPAA LSLKQFLQRQ KVLCLYRDLQ RTIRRVPHES DRKYLRDWAR DEFRRNKSNT
DQDAIRMMIS QAHNHLEELR RSLALAGC