LYRM9_HUMAN
ID LYRM9_HUMAN Reviewed; 78 AA.
AC A8MSI8; A6NJT7; Q6X7B8;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=LYR motif-containing protein 9;
GN Name=LYRM9; Synonyms=C17orf108; ORFNames=HSD24;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Fetal brain;
RA Li W.B., Gruber C., Jessee J., Polayes D.;
RT "Full-length cDNA libraries and normalization.";
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16625196; DOI=10.1038/nature04689;
RA Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R.,
RA Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A.,
RA Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J.,
RA Chang J.L., Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J.,
RA DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S.,
RA Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E.,
RA Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K.,
RA LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J.,
RA Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A.,
RA Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K.,
RA Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D.,
RA Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A.,
RA Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.;
RT "DNA sequence of human chromosome 17 and analysis of rearrangement in the
RT human lineage.";
RL Nature 440:1045-1049(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA Hunkapiller M.W., Myers E.W., Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 17-78.
RC TISSUE=Testis;
RA Wu N., Miao S.Y., Zhang X.D., Qiao Y., Liang G., Wang L.F.;
RT "A new spermatogenesis-related gene.";
RL Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the complex I LYR family. LYRM9 subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAP20058.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};
CC Sequence=EAW51051.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; CR601114; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; AC005697; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471159; EAW51051.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AY251535; AAP20058.1; ALT_SEQ; mRNA.
DR CCDS; CCDS45631.1; -.
DR RefSeq; NP_001070148.1; NM_001076680.1.
DR RefSeq; XP_016879814.1; XM_017024325.1.
DR AlphaFoldDB; A8MSI8; -.
DR SMR; A8MSI8; -.
DR STRING; 9606.ENSP00000368397; -.
DR PhosphoSitePlus; A8MSI8; -.
DR BioMuta; LYRM9; -.
DR EPD; A8MSI8; -.
DR MassIVE; A8MSI8; -.
DR PaxDb; A8MSI8; -.
DR PeptideAtlas; A8MSI8; -.
DR PRIDE; A8MSI8; -.
DR ProteomicsDB; 1965; -.
DR Antibodypedia; 26242; 19 antibodies from 12 providers.
DR DNASU; 201229; -.
DR Ensembl; ENST00000379102.8; ENSP00000368396.3; ENSG00000232859.10.
DR Ensembl; ENST00000379103.7; ENSP00000368397.2; ENSG00000232859.10.
DR GeneID; 201229; -.
DR KEGG; hsa:201229; -.
DR MANE-Select; ENST00000379102.8; ENSP00000368396.3; NM_001076680.3; NP_001070148.1.
DR UCSC; uc002gzx.4; human.
DR CTD; 201229; -.
DR DisGeNET; 201229; -.
DR GeneCards; LYRM9; -.
DR HGNC; HGNC:27314; LYRM9.
DR HPA; ENSG00000232859; Low tissue specificity.
DR neXtProt; NX_A8MSI8; -.
DR OpenTargets; ENSG00000232859; -.
DR PharmGKB; PA165431642; -.
DR VEuPathDB; HostDB:ENSG00000232859; -.
DR eggNOG; ENOG502S9QI; Eukaryota.
DR GeneTree; ENSGT00390000002625; -.
DR HOGENOM; CLU_183410_0_0_1; -.
DR InParanoid; A8MSI8; -.
DR OMA; VKQSFKQ; -.
DR OrthoDB; 1593795at2759; -.
DR PhylomeDB; A8MSI8; -.
DR TreeFam; TF335914; -.
DR PathwayCommons; A8MSI8; -.
DR BioGRID-ORCS; 201229; 14 hits in 1074 CRISPR screens.
DR ChiTaRS; LYRM9; human.
DR GenomeRNAi; 201229; -.
DR Pharos; A8MSI8; Tdark.
DR PRO; PR:A8MSI8; -.
DR Proteomes; UP000005640; Chromosome 17.
DR RNAct; A8MSI8; protein.
DR Bgee; ENSG00000232859; Expressed in nucleus accumbens and 178 other tissues.
DR ExpressionAtlas; A8MSI8; baseline and differential.
DR Genevisible; A8MSI8; HS.
DR CDD; cd20269; Complex1_LYR_LYRM9; 1.
DR InterPro; IPR008011; Complex1_LYR_dom.
DR InterPro; IPR045291; Complex1_LYR_LYRM9.
DR Pfam; PF05347; Complex1_LYR; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..78
FT /note="LYR motif-containing protein 9"
FT /id="PRO_0000345398"
SQ SEQUENCE 78 AA; 9374 MW; 3E572BC92CCB24C3 CRC64;
MAPLPGAELV RRPLQLYRYL LRCCQQLPTK GIQQHYKHAV RQSFRVHSDE DNPERIQQII
KRAIEDADWI MNKYKKQN
