LYS4_CANPA
ID LYS4_CANPA Reviewed; 688 AA.
AC Q2HZ33;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 57.
DE RecName: Full=Homoaconitase, mitochondrial;
DE EC=4.2.1.36;
DE AltName: Full=Homoaconitate hydratase;
DE Flags: Precursor;
GN Name=LYS4;
OS Candida parapsilosis (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=5480;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=CBS 604;
RA Gavenciakova B., Kosa P., Nosek J.;
RT "Candida parapsilosis LYS4 gene.";
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the reversible hydration of cis-homoaconitate to
CC (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for
CC lysine biosynthesis. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R,3S)-homoisocitrate = cis-homoaconitate + H2O;
CC Xref=Rhea:RHEA:15485, ChEBI:CHEBI:15377, ChEBI:CHEBI:15404,
CC ChEBI:CHEBI:58174; EC=4.2.1.36;
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250};
CC Note=Binds 1 [4Fe-4S] cluster per subunit. {ECO:0000250};
CC -!- PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via AAA
CC pathway; L-alpha-aminoadipate from 2-oxoglutarate: step 3/5.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the aconitase/IPM isomerase family.
CC {ECO:0000305}.
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DR EMBL; DQ359726; ABC94604.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2HZ33; -.
DR SMR; Q2HZ33; -.
DR CGD; CAL0000151989; CPAR2_500690.
DR VEuPathDB; FungiDB:CPAR2_500690; -.
DR UniPathway; UPA00033; UER01027.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0004409; F:homoaconitate hydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0019878; P:lysine biosynthetic process via aminoadipic acid; IEA:UniProtKB-UniPathway.
DR CDD; cd01674; Homoaconitase_Swivel; 1.
DR Gene3D; 3.20.19.10; -; 1.
DR Gene3D; 3.30.499.10; -; 2.
DR InterPro; IPR015931; Acnase/IPM_dHydase_lsu_aba_1/3.
DR InterPro; IPR001030; Acoase/IPM_deHydtase_lsu_aba.
DR InterPro; IPR015928; Aconitase/3IPM_dehydase_swvl.
DR InterPro; IPR018136; Aconitase_4Fe-4S_BS.
DR InterPro; IPR036008; Aconitase_4Fe-4S_dom.
DR InterPro; IPR000573; AconitaseA/IPMdHydase_ssu_swvl.
DR InterPro; IPR004418; Homoaconitase_mito.
DR InterPro; IPR039386; Homoaconitase_swivel.
DR Pfam; PF00330; Aconitase; 1.
DR Pfam; PF00694; Aconitase_C; 1.
DR PRINTS; PR00415; ACONITASE.
DR SUPFAM; SSF53732; SSF53732; 1.
DR TIGRFAMs; TIGR00139; h_aconitase; 1.
DR PROSITE; PS00450; ACONITASE_1; 1.
DR PROSITE; PS01244; ACONITASE_2; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Iron; Iron-sulfur; Lyase; Lysine biosynthesis;
KW Metal-binding; Mitochondrion; Transit peptide.
FT TRANSIT 1..?
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN ?..688
FT /note="Homoaconitase, mitochondrial"
FT /id="PRO_0000247920"
FT REGION 468..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..485
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 335
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 395
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 398
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
SQ SEQUENCE 688 AA; 74577 MW; 9130D4C19E7BC84E CRC64;
MRLHLHRFIS TSTPLRSGQN LTEKIVQKYA VNLPPNKLVH TGDYVTIKPA HCMSHDNSWP
VATKFMGLGA KRVKDNRQIV CTLDHDVQNK TEKNLAKYAN IERFAKEQGI DFYPAGRGIG
HQIMIEEGYA FPLNLTVASD SHSNTYGGVG SLGTPIVRTD AASIWATVQT WWQIPPVAKV
ELKGNLQNGV TGKDIIVALC GVFNNDEVLN HAIEFVGDGV ENLPIDYRLT IANMTTEWGA
LSGLFPIDDK LIEFYEGRLQ KLGPNHPRIN KDTIEALRRG SLASDEDAKY AKHLVIDLNT
LSPYVSGPNS VKVSNPLSKL SQDNIAINKA YLVSCTNSRL SDIQAAADVL KGHKVHPNVE
FYVAAASSLV QQDAEAAGAW QTIIDAGAKP LPAGCGPCIG LGTGLLKDGE VGISATNRNF
KGRMGSKDAL AYLASPEVVA ASAVLGKIGA PEEIDGKPVN ASPEIVKSID LPKSSGNTGA
TSEEPISEDD TSEASVEVLP GFPKSIQGEL ILCNADNINT DGIYPGKYTY QDDISREQMA
EVCMENYDPE FKTKTKSDDI IISGYNFGTG SSREQAATCI LARGMKLVVA GSFGNIFSRN
SINNALLTLE IPELIEKLRV KYDGVNELTI RTGWFLKWDV TKALVTVADL DGEVILQQKV
GELGTNLQDI IVKGGLEGWV KSELQKEQ