LYS4_CHAGB
ID LYS4_CHAGB Reviewed; 797 AA.
AC Q2GN26;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 21-MAR-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Homoaconitase, mitochondrial;
DE EC=4.2.1.36;
DE AltName: Full=Homoaconitate hydratase;
DE Flags: Precursor;
GN Name=LYS4; ORFNames=CHGG_10628;
OS Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
OS NRRL 1970) (Soil fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.
OX NCBI_TaxID=306901;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970;
RX PubMed=25720678; DOI=10.1128/genomea.00021-15;
RA Cuomo C.A., Untereiner W.A., Ma L.-J., Grabherr M., Birren B.W.;
RT "Draft genome sequence of the cellulolytic fungus Chaetomium globosum.";
RL Genome Announc. 3:E0002115-E0002115(2015).
CC -!- FUNCTION: Catalyzes the reversible hydration of cis-homoaconitate to
CC (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for
CC lysine biosynthesis. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R,3S)-homoisocitrate = cis-homoaconitate + H2O;
CC Xref=Rhea:RHEA:15485, ChEBI:CHEBI:15377, ChEBI:CHEBI:15404,
CC ChEBI:CHEBI:58174; EC=4.2.1.36;
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250};
CC Note=Binds 1 [4Fe-4S] cluster per subunit. {ECO:0000250};
CC -!- PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via AAA
CC pathway; L-alpha-aminoadipate from 2-oxoglutarate: step 3/5.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the aconitase/IPM isomerase family.
CC {ECO:0000305}.
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DR EMBL; CH408035; EAQ84224.1; -; Genomic_DNA.
DR RefSeq; XP_001228555.1; XM_001228554.1.
DR AlphaFoldDB; Q2GN26; -.
DR SMR; Q2GN26; -.
DR STRING; 38033.XP_001228555.1; -.
DR EnsemblFungi; EAQ84224; EAQ84224; CHGG_10628.
DR GeneID; 4396424; -.
DR eggNOG; KOG0453; Eukaryota.
DR HOGENOM; CLU_006714_3_1_1; -.
DR InParanoid; Q2GN26; -.
DR OMA; VMIRPEH; -.
DR OrthoDB; 265826at2759; -.
DR UniPathway; UPA00033; UER01027.
DR Proteomes; UP000001056; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0004409; F:homoaconitate hydratase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0019878; P:lysine biosynthetic process via aminoadipic acid; IEA:UniProtKB-UniPathway.
DR CDD; cd01674; Homoaconitase_Swivel; 1.
DR Gene3D; 3.20.19.10; -; 1.
DR Gene3D; 3.30.499.10; -; 2.
DR InterPro; IPR015931; Acnase/IPM_dHydase_lsu_aba_1/3.
DR InterPro; IPR001030; Acoase/IPM_deHydtase_lsu_aba.
DR InterPro; IPR015928; Aconitase/3IPM_dehydase_swvl.
DR InterPro; IPR018136; Aconitase_4Fe-4S_BS.
DR InterPro; IPR036008; Aconitase_4Fe-4S_dom.
DR InterPro; IPR000573; AconitaseA/IPMdHydase_ssu_swvl.
DR InterPro; IPR004418; Homoaconitase_mito.
DR InterPro; IPR039386; Homoaconitase_swivel.
DR Pfam; PF00330; Aconitase; 1.
DR Pfam; PF00694; Aconitase_C; 1.
DR PRINTS; PR00415; ACONITASE.
DR SUPFAM; SSF53732; SSF53732; 1.
DR TIGRFAMs; TIGR00139; h_aconitase; 1.
DR PROSITE; PS00450; ACONITASE_1; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis; Iron; Iron-sulfur; Lyase; Lysine biosynthesis;
KW Metal-binding; Mitochondrion; Reference proteome; Transit peptide.
FT TRANSIT 1..47
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 48..797
FT /note="Homoaconitase, mitochondrial"
FT /id="PRO_0000247921"
FT BINDING 404
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 471
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 474
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
SQ SEQUENCE 797 AA; 85257 MW; 251AAFF95459BD27 CRC64;
MVARFVPSAM TVLVARRGLA MASTRRGWRG LAVNLKPAAG RQWRQAYSTT PVRQNALHSE
IEAQAASPFA APGTRVQNPQ TLTEKIVQRY AIGLPPGKKV KAGDYVTISP AQCMTHDNSW
PVVTKFTSIG ATKIHNNRQV VVTLDHDVQN TSESNLKKYK NIENFARQHG VDFYPAGRGI
GHQIMIEEGY AWPGTLTVAS DSHSNMYGGV AALGTPVVRT DAASIWATGQ TWWQIPPIAK
VTFTGVLPRG VTGKDVIIAL CALFNQDEVL NHAIEFTGSD LTLSSLPIDD RLTISNMTTE
WGAVAGIFPI DSTLKSWLRA KATVSAMLNP DLGGKARITH DKIEELFRDP PKPDLGATYA
KSLYLNLSTL SPFVAGPNSV KVATPVKDLE AQNIKINKAY LVSCTNSRAS DIAAAANVFR
EAANGGPIPK VAPGVEFYIS AASLPEQEIA EQAGDWRVLL DAGCIENPAS CNACIGLGRG
LLQPGDVGIS ASNRNWNGRM GSPQAKAYLA SPEVVAASAL KGEIAGPGWY EKPEGVEKVI
IGEGTGDLEA DRAVSIADAL ESLVAQAESM ISSAEKSLES SPAAATGAVG NAMADATADQ
AGEEGLIDIL PGFPEKVSGE IVFCDSDNIN TDGIYPGKYT YQDDITRDTM AQVVMENYDR
SFASLAKPGD ILVAGFNFGC GSSREQAATA ILAKGIPLVV AGSFGNIFSR NSINNALMGV
EVPRLVKRLR EEFGEKVPTR RTGWRFEWDV RRSKVTVTEG EGGETWSQKV GDLPPNVQEI
IAVGGLEKWV KHRISQA