LYSDH_GEOSE
ID LYSDH_GEOSE Reviewed; 385 AA.
AC Q9AJC6;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=Lysine 6-dehydrogenase;
DE EC=1.4.1.18;
DE AltName: Full=L-lysine 6-dehydrogenase;
DE AltName: Full=L-lysine epsilon-dehydrogenase;
GN Name=lysDH;
OS Geobacillus stearothermophilus (Bacillus stearothermophilus).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.
OX NCBI_TaxID=1422;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 1-25, FUNCTION,
RP SUBUNIT, CATALYTIC ACTIVITY, AND BIOPHYSICOCHEMICAL PROPERTIES.
RC STRAIN=UTB 1103;
RX PubMed=14766574; DOI=10.1128/aem.70.2.937-942.2004;
RA Heydari M., Ohshima T., Nunoura-Kominato N., Sakuraba H.;
RT "Highly stable L-lysine 6-dehydrogenase from the thermophile Geobacillus
RT stearothermophilus isolated from a Japanese hot spring: characterization,
RT gene cloning and sequencing, and expression.";
RL Appl. Environ. Microbiol. 70:937-942(2004).
CC -!- FUNCTION: Catalyzes the oxidative deamination of L-lysine in the
CC presence of NAD. Can also use (S)-(2-aminoethyl)-L-cysteine as a
CC substrate, but more slowly. Can use both NAD and NADP but the preferred
CC substrate is NAD. {ECO:0000269|PubMed:14766574}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-lysine + NAD(+) = 2 H(+) + L-1-piperideine-6-carboxylate +
CC NADH + NH4(+); Xref=Rhea:RHEA:12408, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:28938, ChEBI:CHEBI:32551, ChEBI:CHEBI:57540,
CC ChEBI:CHEBI:57945, ChEBI:CHEBI:58769; EC=1.4.1.18;
CC Evidence={ECO:0000269|PubMed:14766574};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=0.73 mM for L-lysine {ECO:0000269|PubMed:14766574};
CC KM=0.088 mM for NAD(+) {ECO:0000269|PubMed:14766574};
CC KM=0.48 mM for NADP(+) {ECO:0000269|PubMed:14766574};
CC pH dependence:
CC Optimum pH is 10.1. {ECO:0000269|PubMed:14766574};
CC Temperature dependence:
CC Optimum temperature is 70.0 degrees Celsius.
CC {ECO:0000269|PubMed:14766574};
CC -!- SUBUNIT: Homohexamer. {ECO:0000269|PubMed:14766574}.
CC -!- SIMILARITY: Belongs to the saccharopine dehydrogenase family.
CC {ECO:0000305}.
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DR EMBL; AB052732; BAB39707.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9AJC6; -.
DR SMR; Q9AJC6; -.
DR KEGG; ag:BAB39707; -.
DR BioCyc; MetaCyc:MON-12440; -.
DR BRENDA; 1.4.1.18; 623.
DR GO; GO:0050303; F:lysine 6-dehydrogenase activity; IDA:UniProtKB.
DR GO; GO:0051260; P:protein homooligomerization; IDA:UniProtKB.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR032095; Sacchrp_dh-like_C.
DR InterPro; IPR005097; Sacchrp_dh_NADP.
DR Pfam; PF16653; Sacchrp_dh_C; 1.
DR Pfam; PF03435; Sacchrp_dh_NADP; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; NAD; Oxidoreductase.
FT CHAIN 1..385
FT /note="Lysine 6-dehydrogenase"
FT /id="PRO_0000418763"
SQ SEQUENCE 385 AA; 42240 MW; 3D9CF8E1114D8439 CRC64;
MKVLVLGAGL MGKEAARDLV QSQDVEAVTL ADVDLAKAEQ TVRQLHSKKL AAVRVDAGDP
QQLAAAMKGH DVVVNALFYQ FNETVAKTAI ETGVHSVDLG GHIGHITDRV LELHERAQAA
GVTIIPDLGV APGMINILSG YGASQLDEVE SILLYVGGIP VRPEPPLEYN HVFSLEGLLD
HYTDPALIIR NGQKQEVPSL SEVEPIYFDR FGPLEAFHTS GGTSTLSRSF PNLKRLEYKT
IRYRGHAEKC KLLVDLTLTR HDVEVEINGC RVKPRDVLLS VLKPLLDLKG KDDVVLLRVI
VGGRKDGKET VLEYETVTFN DRENKVTAMA RTTAYTISAV AQLIGRGVIT KRGVYPPEQI
VPGDVYMDEM KKRGVLISEK RTVHS